Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.85■□□□□ 0.61
COPEO14579 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.84■□□□□ 0.61
COPEO14579 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.84■□□□□ 0.61
COPEO14579 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COPEO14579 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
COPEO14579 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.84■□□□□ 0.61
COPEO14579 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.84■□□□□ 0.61
COPEO14579 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.84■□□□□ 0.61
COPEO14579 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.84■□□□□ 0.61
COPEO14579 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COPEO14579 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COPEO14579 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPEO14579 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.84■□□□□ 0.61
COPEO14579 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COPEO14579 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
COPEO14579 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.83■□□□□ 0.61
COPEO14579 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.83■□□□□ 0.61
COPEO14579 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
COPEO14579 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.83■□□□□ 0.61
COPEO14579 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COPEO14579 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COPEO14579 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COPEO14579 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COPEO14579 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COPEO14579 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COPEO14579 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.83■□□□□ 0.61
COPEO14579 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COPEO14579 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
COPEO14579 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPEO14579 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.83■□□□□ 0.6
COPEO14579 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.83■□□□□ 0.6
COPEO14579 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.83■□□□□ 0.6
COPEO14579 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPEO14579 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPEO14579 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
COPEO14579 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPEO14579 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.83■□□□□ 0.6
COPEO14579 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPEO14579 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPEO14579 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.82■□□□□ 0.6
COPEO14579 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 TSPY23P-201ENST00000440136 739 ntBASIC18.82■□□□□ 0.6
COPEO14579 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.82■□□□□ 0.6
COPEO14579 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.82■□□□□ 0.6
COPEO14579 PNMA6B-201ENST00000538162 1200 ntBASIC18.82■□□□□ 0.6
COPEO14579 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.82■□□□□ 0.6
COPEO14579 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.82■□□□□ 0.6
COPEO14579 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 AP000997.3-201ENST00000623333 2250 ntBASIC18.82■□□□□ 0.6
COPEO14579 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COPEO14579 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.82■□□□□ 0.6
COPEO14579 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.82■□□□□ 0.6
COPEO14579 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPEO14579 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPEO14579 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPEO14579 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COPEO14579 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COPEO14579 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COPEO14579 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms