Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN4O14493 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN4O14493 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN4O14493 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN4O14493 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLDN4O14493 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN4O14493 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 HMGA1P5-201ENST00000412453 271 ntBASIC17.73■□□□□ 0.43
CLDN4O14493 ECEL1P2-202ENST00000465689 757 ntBASIC17.73■□□□□ 0.43
CLDN4O14493 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN4O14493 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN4O14493 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN4O14493 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLDN4O14493 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN4O14493 AL512353.2-201ENST00000448759 1962 ntBASIC17.73■□□□□ 0.43
CLDN4O14493 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN4O14493 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN4O14493 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.72■□□□□ 0.43
CLDN4O14493 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLDN4O14493 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLDN4O14493 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN4O14493 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN4O14493 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN4O14493 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.72■□□□□ 0.43
CLDN4O14493 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.72■□□□□ 0.43
CLDN4O14493 AC012306.2-201ENST00000609350 630 ntBASIC17.72■□□□□ 0.43
CLDN4O14493 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CLDN4O14493 AC005363.2-201ENST00000618631 242 ntBASIC17.72■□□□□ 0.43
CLDN4O14493 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLDN4O14493 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN4O14493 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN4O14493 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN4O14493 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN4O14493 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLDN4O14493 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN4O14493 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN4O14493 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN4O14493 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN4O14493 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLDN4O14493 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLDN4O14493 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN4O14493 LIN28AP1-201ENST00000429574 405 ntBASIC17.71■□□□□ 0.43
CLDN4O14493 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLDN4O14493 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN4O14493 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN4O14493 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CLDN4O14493 AL049812.1-201ENST00000432563 2267 ntBASIC17.71■□□□□ 0.43
CLDN4O14493 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CLDN4O14493 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN4O14493 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN4O14493 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
CLDN4O14493 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms