Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 KRT17P2-201ENST00000300992 1314 ntBASIC17.97■□□□□ 0.47
RTCAO00442 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RTCAO00442 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.96■□□□□ 0.47
RTCAO00442 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTCAO00442 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RTCAO00442 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.96■□□□□ 0.47
RTCAO00442 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.96■□□□□ 0.47
RTCAO00442 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 KRT8P3-201ENST00000519669 1449 ntBASIC17.96■□□□□ 0.47
RTCAO00442 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTCAO00442 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTCAO00442 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTCAO00442 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
RTCAO00442 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTCAO00442 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.95■□□□□ 0.46
RTCAO00442 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RTCAO00442 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.95■□□□□ 0.46
RTCAO00442 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.95■□□□□ 0.46
RTCAO00442 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.95■□□□□ 0.46
RTCAO00442 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RTCAO00442 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.95■□□□□ 0.46
RTCAO00442 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
RTCAO00442 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RTCAO00442 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTCAO00442 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.94■□□□□ 0.46
RTCAO00442 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.94■□□□□ 0.46
RTCAO00442 AL031598.1-201ENST00000561511 1773 ntBASIC17.94■□□□□ 0.46
RTCAO00442 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.94■□□□□ 0.46
RTCAO00442 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.94■□□□□ 0.46
RTCAO00442 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RTCAO00442 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.94■□□□□ 0.46
RTCAO00442 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTCAO00442 MIR1238-201ENST00000408483 83 ntBASIC17.94■□□□□ 0.46
RTCAO00442 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.94■□□□□ 0.46
RTCAO00442 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 AC008622.2-201ENST00000617006 1229 ntBASIC17.94■□□□□ 0.46
RTCAO00442 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTCAO00442 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTCAO00442 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RTCAO00442 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RTCAO00442 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RTCAO00442 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.93■□□□□ 0.46
RTCAO00442 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
RTCAO00442 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.93■□□□□ 0.46
RTCAO00442 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RTCAO00442 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.93■□□□□ 0.46
RTCAO00442 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
RTCAO00442 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 HEIH-201ENST00000623091 1652 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms