Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ASB1-202ENST00000409297 878 ntTSL 5 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 AC087393.1-201ENST00000582896 145 ntBASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 AL354751.1-201ENST00000412768 1863 ntBASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
CHKB-CPT1BH3BT56 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 AC090164.3-201ENST00000610780 2143 ntBASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 MLEC-202ENST00000412616 841 ntTSL 3 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC10.46□□□□□ -0.73
CHKB-CPT1BH3BT56 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 CROCCP2-202ENST00000412962 2773 ntBASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 LINC00554-201ENST00000564841 3011 ntBASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHKB-CPT1BH3BT56 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms