Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 AP001160.3-201ENST00000601484 763 ntBASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 MIR4466-201ENST00000606121 54 ntBASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 FEM1AP3-201ENST00000403722 1741 ntBASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 AC012317.2-201ENST00000623305 2251 ntBASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 AC099791.1-201ENST00000416440 715 ntBASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 CASP6-205ENST00000505486 538 ntTSL 4 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 AC027682.1-201ENST00000562846 899 ntBASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRAV13-2A0A0B4J235 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 NT5C3AP1-201ENST00000394500 1012 ntBASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 AL354811.1-201ENST00000610286 706 ntBASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV13-2A0A0B4J235 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms