Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 AC008556.1-201ENST00000610908 2040 ntBASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 KRT18P56-201ENST00000507275 550 ntBASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 FP475955.4-201ENST00000623131 1990 ntBASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 KRT18P23-201ENST00000435622 1283 ntBASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 SPDYE13P-201ENST00000445314 798 ntBASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV19A0A0A6YYK7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 KRT8P7-201ENST00000533003 1432 ntBASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 AL645929.1-201ENST00000420084 975 ntBASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 KRT8P32-201ENST00000512863 1461 ntBASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV19A0A0A6YYK7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 MIR3917-201ENST00000580971 93 ntBASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 AL157888.1-201ENST00000631930 593 ntBASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV19A0A0A6YYK7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 MIR564-202ENST00000385049 94 ntBASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 HCG4P8-203ENST00000443049 980 ntBASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms