Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 KRT8P32-201ENST00000512863 1461 ntBASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AC020763.4-201ENST00000623414 4170 ntBASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AC004408.2-201ENST00000623613 2777 ntBASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AL031598.1-201ENST00000561511 1773 ntBASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 HEIH-201ENST00000623091 1652 ntBASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AL138781.2-201ENST00000617896 1843 ntBASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AL512353.2-201ENST00000448759 1962 ntBASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
TRBV7-1A0A0A6YYK4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 CRYGFP-201ENST00000418459 633 ntBASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AP005242.2-201ENST00000580065 1175 ntBASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AC068587.9-201ENST00000641814 219 ntBASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV7-1A0A0A6YYK4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV7-1A0A0A6YYK4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms