Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
LCE4AQ5TA78 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
LCE4AQ5TA78 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
LCE4AQ5TA78 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
LCE4AQ5TA78 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC1.25□□□□□ -2.21
LCE4AQ5TA78 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LCE4AQ5TA78 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 SNORA27.2-201ENST00000363365 126 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 SNORA80A-201ENST00000363922 136 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 SNORA3C-201ENST00000408792 125 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 CKS1BP6-201ENST00000424932 240 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 RNU7-90P-201ENST00000459216 62 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 RNA5SP249-201ENST00000516127 99 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 MIR4672-201ENST00000583126 81 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 MIR432-201ENST00000606207 94 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 AC006386.2-201ENST00000624491 75 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 AC012005.1-201ENST00000624575 75 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 MIR6828-201ENST00000636181 60 ntBASIC1.24□□□□□ -2.21
LCE4AQ5TA78 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LCE4AQ5TA78 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 MIR302D-201ENST00000362275 68 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 RNU4-35P-201ENST00000362588 141 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 RNU6-439P-201ENST00000384188 106 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 MIR490-201ENST00000384865 128 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 RN7SL863P-201ENST00000462370 296 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 SNORA31.25-201ENST00000517242 134 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 RNU6-1174P-201ENST00000517278 101 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 AL353803.5-201ENST00000599815 141 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 MIR7106-201ENST00000612419 65 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 MIR8074-201ENST00000615081 81 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 uc_338.32-201ENST00000615087 172 ntBASIC1.23□□□□□ -2.21
LCE4AQ5TA78 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LCE4AQ5TA78 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 SNORD35B-201ENST00000363660 87 ntBASIC1.22□□□□□ -2.21
LCE4AQ5TA78 RNY1P8-201ENST00000383970 114 ntBASIC1.22□□□□□ -2.21
LCE4AQ5TA78 SNORA80D-201ENST00000384488 135 ntBASIC1.22□□□□□ -2.21
LCE4AQ5TA78 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 MIR1911-201ENST00000410783 80 ntBASIC1.22□□□□□ -2.21
LCE4AQ5TA78 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
LCE4AQ5TA78 RNU7-143P-201ENST00000516781 65 ntBASIC1.22□□□□□ -2.21
LCE4AQ5TA78 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 MIR7702-201ENST00000621931 59 ntBASIC1.22□□□□□ -2.21
LCE4AQ5TA78 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
LCE4AQ5TA78 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 SNORA5B-201ENST00000363786 132 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 SNORD114-29-201ENST00000364819 70 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 MIR199A2-201ENST00000385289 110 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 SNORD66.1-201ENST00000391230 76 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 U7.5-201ENST00000517224 61 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 MIR5004-201ENST00000579078 107 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 AL137849.1-201ENST00000604767 169 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 MIR7112-201ENST00000616126 65 ntBASIC1.21□□□□□ -2.22
LCE4AQ5TA78 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
LCE4AQ5TA78 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LCE4AQ5TA78 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LCE4AQ5TA78 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms