RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 CHIC1Q5VXU3 224 aa5.32□□□□□ -1.56
TRAJ39-201ENST00000390498 AEBP2Q6ZN18 517 aaPredicted RBP5.13□□□□□ -1.59
TRAJ39-201ENST00000390498 PHF23Q9BUL5 403 aaPredicted RBP4.69□□□□□ -1.66
TRAJ39-201ENST00000390498 PLPPR3Q6T4P5 718 aa4.46□□□□□ -1.7
TRAJ39-201ENST00000390498 SENP3Q9H4L4 574 aaPredicted RBP4.34□□□□□ -1.71
TRAJ39-201ENST00000390498 EHMT2Q96KQ7 1210 aa4.23□□□□□ -1.73
TRAJ39-201ENST00000390498 KCNA4P22459 653 aa4.17□□□□□ -1.74
TRAJ39-201ENST00000390498 ADRA2BP18089 450 aa4.12□□□□□ -1.75
TRAJ39-201ENST00000390498 CSRNP3Q8WYN3 585 aa4.07□□□□□ -1.76
TRAJ39-201ENST00000390498 SLC4A1APQ9BWU0 796 aaKnown RBP4.04□□□□□ -1.76
TRAJ39-201ENST00000390498 PPP6R1Q9UPN7 881 aa4.04□□□□□ -1.76
TRAJ39-201ENST00000390498 FOXD1Q16676 465 aa3.97□□□□□ -1.77
TRAJ39-201ENST00000390498 SLC24A1O60721 1099 aa3.96□□□□□ -1.78
TRAJ39-201ENST00000390498 NCBP3Q53F19 620 aaKnown RBP3.96□□□□□ -1.78
TRAJ39-201ENST00000390498 PPP4R3CPQ6ZMV5 832 aa3.95□□□□□ -1.78
TRAJ39-201ENST00000390498 NPM3O75607 178 aaKnown RBP3.88□□□□□ -1.79
TRAJ39-201ENST00000390498 AMER1Q5JTC6 1135 aaPredicted RBP3.88□□□□□ -1.79
TRAJ39-201ENST00000390498 ZBTB22O15209 634 aa3.84□□□□□ -1.79
TRAJ39-201ENST00000390498 RTN4Q9NQC3 1192 aaKnown RBP3.84□□□□□ -1.79
TRAJ39-201ENST00000390498 PIAS4Q8N2W9 510 aaPredicted RBP3.81□□□□□ -1.8
TRAJ39-201ENST00000390498 CNKSR2Q8WXI2 1034 aa3.79□□□□□ -1.8
TRAJ39-201ENST00000390498 FOXD4L1Q9NU39 408 aa3.78□□□□□ -1.8
TRAJ39-201ENST00000390498 DNAJC5BQ9UF47 199 aa3.77□□□□□ -1.81
TRAJ39-201ENST00000390498 SCAF1Q9H7N4 1312 aaKnown RBP3.75□□□□□ -1.81
TRAJ39-201ENST00000390498 FKBP8Q14318 412 aa3.66□□□□□ -1.82
TRAJ39-201ENST00000390498 ATXN8OSP0DMR3 200 aa3.65□□□□□ -1.83
TRAJ39-201ENST00000390498 RNF216Q9NWF9 866 aaPredicted RBP3.65□□□□□ -1.83
TRAJ39-201ENST00000390498 MYCNP04198 464 aaPredicted RBP3.59□□□□□ -1.83
TRAJ39-201ENST00000390498 MSH5O43196 834 aa3.58□□□□□ -1.84
TRAJ39-201ENST00000390498 SLC4A2P04920 1241 aa3.58□□□□□ -1.84
TRAJ39-201ENST00000390498 MAPK8IP2Q13387 824 aaPredicted RBP3.58□□□□□ -1.84
TRAJ39-201ENST00000390498 HOXD11P31277 338 aaPredicted RBP3.55□□□□□ -1.84
TRAJ39-201ENST00000390498 PLCB2Q00722 1185 aa3.54□□□□□ -1.84
TRAJ39-201ENST00000390498 BCANQ96GW7 911 aa3.51□□□□□ -1.85
TRAJ39-201ENST00000390498 DMRT2Q9Y5R5 561 aa3.51□□□□□ -1.85
TRAJ39-201ENST00000390498 FBXO3Q9UK99 471 aa3.49□□□□□ -1.85
TRAJ39-201ENST00000390498 HAP1P54257 671 aaPredicted RBP3.48□□□□□ -1.85
TRAJ39-201ENST00000390498 VSIG10Q8N0Z9 540 aa3.47□□□□□ -1.85
TRAJ39-201ENST00000390498 TAOK2Q9UL54 1235 aa3.46□□□□□ -1.86
TRAJ39-201ENST00000390498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.45□□□□□ -1.86
TRAJ39-201ENST00000390498 PRKCSHP14314 528 aaPredicted RBP3.45□□□□□ -1.86
TRAJ39-201ENST00000390498 HNRNPUL2Q1KMD3 747 aaKnown RBP3.45□□□□□ -1.86
TRAJ39-201ENST00000390498 SAMD1Q6SPF0 538 aaPredicted RBP3.44□□□□□ -1.86
TRAJ39-201ENST00000390498 ATF5Q9Y2D1 282 aaPredicted RBP3.44□□□□□ -1.86
TRAJ39-201ENST00000390498 DCAF8L2P0C7V8 631 aa3.41□□□□□ -1.86
TRAJ39-201ENST00000390498 VASPP50552 380 aaPredicted RBP3.4□□□□□ -1.87
TRAJ39-201ENST00000390498 SPDYE4A6NLX3 237 aa3.39□□□□□ -1.87
TRAJ39-201ENST00000390498 TPRNQ4KMQ1 711 aa3.39□□□□□ -1.87
TRAJ39-201ENST00000390498 PROM2Q8N271 834 aa3.39□□□□□ -1.87
TRAJ39-201ENST00000390498 BBXQ8WY36 941 aaPredicted RBP3.38□□□□□ -1.87
TRAJ39-201ENST00000390498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAJ39-201ENST00000390498 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.38□□□□□ -1.87
TRAJ39-201ENST00000390498 PKD2Q13563 968 aa3.37□□□□□ -1.87
TRAJ39-201ENST00000390498 IFNLR1Q8IU57 520 aaPredicted RBP3.37□□□□□ -1.87
TRAJ39-201ENST00000390498 ZNF219Q9P2Y4 722 aaPredicted RBP3.37□□□□□ -1.87
TRAJ39-201ENST00000390498 KDM2AQ9Y2K7 1162 aa3.36□□□□□ -1.87
TRAJ39-201ENST00000390498 APLP2Q06481 763 aa3.35□□□□□ -1.87
TRAJ39-201ENST00000390498 U3KPZ7 1027 aaPredicted RBP3.34□□□□□ -1.87
TRAJ39-201ENST00000390498 FBLN2P98095 1184 aa3.33□□□□□ -1.88
TRAJ39-201ENST00000390498 PAXIP1Q6ZW49 1069 aaPredicted RBP3.33□□□□□ -1.88
TRAJ39-201ENST00000390498 ERICH6Q7L0X2 663 aa3.32□□□□□ -1.88
TRAJ39-201ENST00000390498 CFAP44Q96MT7 982 aa3.32□□□□□ -1.88
TRAJ39-201ENST00000390498 DCAF8L1A6NGE4 600 aa3.31□□□□□ -1.88
TRAJ39-201ENST00000390498 MKRN4PQ13434 485 aaPredicted RBP3.31□□□□□ -1.88
TRAJ39-201ENST00000390498 SPRYD3Q8NCJ5 442 aa3.31□□□□□ -1.88
TRAJ39-201ENST00000390498 SPOCK2Q92563 424 aa3.31□□□□□ -1.88
TRAJ39-201ENST00000390498 ECM2O94769 699 aaPredicted RBP3.3□□□□□ -1.88
TRAJ39-201ENST00000390498 NPM1P06748 294 aaKnown RBP eCLIP3.3□□□□□ -1.88
TRAJ39-201ENST00000390498 ARXQ96QS3 562 aa3.3□□□□□ -1.88
TRAJ39-201ENST00000390498 NBR1Q14596 966 aa3.29□□□□□ -1.88
TRAJ39-201ENST00000390498 DAXXQ9UER7 740 aaPredicted RBP3.29□□□□□ -1.88
TRAJ39-201ENST00000390498 KLHL34Q8N239 644 aa3.28□□□□□ -1.88
TRAJ39-201ENST00000390498 TSHZ2Q9NRE2 1034 aa3.28□□□□□ -1.88
TRAJ39-201ENST00000390498 TIMELESSQ9UNS1 1208 aa3.28□□□□□ -1.88
TRAJ39-201ENST00000390498 GTF3C3Q9Y5Q9 886 aa3.28□□□□□ -1.88
TRAJ39-201ENST00000390498 TULP1O00294 542 aaPredicted RBP3.27□□□□□ -1.89
TRAJ39-201ENST00000390498 DNAJC5Q9H3Z4 198 aa3.27□□□□□ -1.89
TRAJ39-201ENST00000390498 RGL2O15211 777 aa3.25□□□□□ -1.89
TRAJ39-201ENST00000390498 STAG3Q9UJ98 1225 aa3.25□□□□□ -1.89
TRAJ39-201ENST00000390498 CHGAP10645 457 aaKnown RBP3.23□□□□□ -1.89
TRAJ39-201ENST00000390498 TMEM132AQ24JP5 1023 aa3.23□□□□□ -1.89
TRAJ39-201ENST00000390498 TRIM41Q8WV44 630 aa3.22□□□□□ -1.89
TRAJ39-201ENST00000390498 ZBTB12Q9Y330 459 aaPredicted RBP3.22□□□□□ -1.89
TRAJ39-201ENST00000390498 POLA2Q14181 598 aa3.21□□□□□ -1.9
TRAJ39-201ENST00000390498 HOMEZQ8IX15 550 aa3.21□□□□□ -1.9
TRAJ39-201ENST00000390498 PLCD3Q8N3E9 789 aa3.21□□□□□ -1.9
TRAJ39-201ENST00000390498 HS6ST3Q8IZP7 471 aa3.2□□□□□ -1.9
TRAJ39-201ENST00000390498 TRHP20396 242 aaPredicted RBP3.19□□□□□ -1.9
TRAJ39-201ENST00000390498 ZBTB47Q9UFB7 747 aaPredicted RBP3.19□□□□□ -1.9
TRAJ39-201ENST00000390498 C14orf37Q86TY3 774 aa3.18□□□□□ -1.9
TRAJ39-201ENST00000390498 MIER1Q8N108 512 aa3.18□□□□□ -1.9
TRAJ39-201ENST00000390498 CIZ1Q9ULV3 898 aaPredicted RBP3.18□□□□□ -1.9
TRAJ39-201ENST00000390498 PLEKHG5O94827 1062 aa3.17□□□□□ -1.9
TRAJ39-201ENST00000390498 ZNF692Q9BU19 519 aaPredicted RBP3.17□□□□□ -1.9
TRAJ39-201ENST00000390498 SPINK5Q9NQ38 1064 aaPredicted RBP3.15□□□□□ -1.91
TRAJ39-201ENST00000390498 SPDYE2BA6NHP3 402 aa3.14□□□□□ -1.91
TRAJ39-201ENST00000390498 GTPBP6O43824 516 aaPredicted RBP3.14□□□□□ -1.91
TRAJ39-201ENST00000390498 CAPN15O75808 1086 aa3.14□□□□□ -1.91
TRAJ39-201ENST00000390498 SPDYE6P0CI01 402 aa3.14□□□□□ -1.91
TRAJ39-201ENST00000390498 GSE1Q14687 1217 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms