RNA–Protein interactions for RNA: ENST00000371117.7

PKHD1-202, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKHD1, Length 16,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-202ENST00000371117 MYT1Q01538 1121 aa8.67□□□□□ -1.02
PKHD1-202ENST00000371117 PELP1Q8IZL8 1130 aaKnown RBP8.48□□□□□ -1.05
PKHD1-202ENST00000371117 TTBK1Q5TCY1 1321 aaPredicted RBP8.03□□□□□ -1.12
PKHD1-202ENST00000371117 ERICH6Q7L0X2 663 aa7.77□□□□□ -1.17
PKHD1-202ENST00000371117 CCER1Q8TC90 406 aaPredicted RBP7.76□□□□□ -1.17
PKHD1-202ENST00000371117 YTHDC1Q96MU7 727 aaKnown RBP7.74□□□□□ -1.17
PKHD1-202ENST00000371117 CENPBP07199 599 aaPredicted RBP7.65□□□□□ -1.19
PKHD1-202ENST00000371117 ZEB1P37275 1124 aaPredicted RBP7.54□□□□□ -1.2
PKHD1-202ENST00000371117 DCAF8L2P0C7V8 631 aa7.42□□□□□ -1.22
PKHD1-202ENST00000371117 RANGAP1P46060 587 aaPredicted RBP7.35□□□□□ -1.23
PKHD1-202ENST00000371117 MYT1LQ9UL68 1186 aa7.3□□□□□ -1.24
PKHD1-202ENST00000371117 NEFLP07196 543 aa7.3□□□□□ -1.24
PKHD1-202ENST00000371117 GLIPR1L2Q4G1C9 344 aa7.3□□□□□ -1.24
PKHD1-202ENST00000371117 RTL5Q5HYW3 569 aaPredicted RBP7.21□□□□□ -1.26
PKHD1-202ENST00000371117 DAXXQ9UER7 740 aaPredicted RBP7.17□□□□□ -1.26
PKHD1-202ENST00000371117 HRCP23327 699 aa7.11□□□□□ -1.27
PKHD1-202ENST00000371117 CLSPNQ9HAW4 1339 aa7.08□□□□□ -1.28
PKHD1-202ENST00000371117 PCGF6Q9BYE7 350 aa7.07□□□□□ -1.28
PKHD1-202ENST00000371117 SLC24A1O60721 1099 aa7.06□□□□□ -1.28
PKHD1-202ENST00000371117 NCLP19338 710 aaKnown RBP6.97□□□□□ -1.29
PKHD1-202ENST00000371117 APLP2Q06481 763 aa6.97□□□□□ -1.29
PKHD1-202ENST00000371117 FAM9AQ8IZU1 332 aaPredicted RBP6.95□□□□□ -1.3
PKHD1-202ENST00000371117 ZNF316A6NFI3 1004 aaPredicted RBP6.94□□□□□ -1.3
PKHD1-202ENST00000371117 EIF5BO60841 1220 aaKnown RBP6.92□□□□□ -1.3
PKHD1-202ENST00000371117 TNNT2P45379 298 aaPredicted RBP6.92□□□□□ -1.3
PKHD1-202ENST00000371117 EHMT2Q96KQ7 1210 aa6.9□□□□□ -1.3
PKHD1-202ENST00000371117 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
PKHD1-202ENST00000371117 CDK11AQ9UQ88 783 aaPredicted RBP6.86□□□□□ -1.31
PKHD1-202ENST00000371117 POLR3GLQ9BT43 218 aa6.85□□□□□ -1.31
PKHD1-202ENST00000371117 SUPT5HO00267 1087 aaKnown RBP6.84□□□□□ -1.31
PKHD1-202ENST00000371117 ANP32BQ92688 251 aaKnown RBP6.84□□□□□ -1.31
PKHD1-202ENST00000371117 NISCHQ9Y2I1 1504 aa6.83□□□□□ -1.32
PKHD1-202ENST00000371117 TRIM44Q96DX7 344 aaPredicted RBP6.82□□□□□ -1.32
PKHD1-202ENST00000371117 ACIN1Q9UKV3 1341 aaKnown RBP6.82□□□□□ -1.32
PKHD1-202ENST00000371117 GTF3C3Q9Y5Q9 886 aa6.82□□□□□ -1.32
PKHD1-202ENST00000371117 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
PKHD1-202ENST00000371117 ANP32EQ9BTT0 268 aa6.79□□□□□ -1.32
PKHD1-202ENST00000371117 ANP32AP39687 249 aaKnown RBP6.79□□□□□ -1.32
PKHD1-202ENST00000371117 PTMSP20962 102 aa6.78□□□□□ -1.32
PKHD1-202ENST00000371117 BCL11AQ9H165 835 aa6.77□□□□□ -1.33
PKHD1-202ENST00000371117 DIEXFQ68CQ4 756 aaKnown RBP6.76□□□□□ -1.33
PKHD1-202ENST00000371117 SHROOM4Q9ULL8 1493 aa6.76□□□□□ -1.33
PKHD1-202ENST00000371117 ERICH6BQ5W0A0 696 aa6.76□□□□□ -1.33
PKHD1-202ENST00000371117 CDK11BP21127 795 aaKnown RBP6.72□□□□□ -1.33
PKHD1-202ENST00000371117 ZBTB47Q9UFB7 747 aaPredicted RBP6.62□□□□□ -1.35
PKHD1-202ENST00000371117 ARID4BQ4LE39 1312 aaPredicted RBP6.59□□□□□ -1.35
PKHD1-202ENST00000371117 PPM1GO15355 546 aaPredicted RBP6.57□□□□□ -1.36
PKHD1-202ENST00000371117 DDRGK1Q96HY6 314 aa6.57□□□□□ -1.36
PKHD1-202ENST00000371117 ATP1B4Q9UN42 357 aaPredicted RBP6.57□□□□□ -1.36
PKHD1-202ENST00000371117 NEFMP07197 916 aa6.56□□□□□ -1.36
PKHD1-202ENST00000371117 RSPH6AQ9H0K4 717 aa6.56□□□□□ -1.36
PKHD1-202ENST00000371117 CALRP27797 417 aaKnown RBP6.55□□□□□ -1.36
PKHD1-202ENST00000371117 LAS1LQ9Y4W2 734 aaKnown RBP6.54□□□□□ -1.36
PKHD1-202ENST00000371117 HMGB1P09429 215 aaKnown RBP6.54□□□□□ -1.36
PKHD1-202ENST00000371117 ANP32CO43423 234 aa6.54□□□□□ -1.36
PKHD1-202ENST00000371117 UPF2Q9HAU5 1272 aaKnown RBP6.53□□□□□ -1.36
PKHD1-202ENST00000371117 HSP90AA1P07900 732 aaKnown RBP6.53□□□□□ -1.36
PKHD1-202ENST00000371117 CNGB1Q14028 1251 aaPredicted RBP6.53□□□□□ -1.36
PKHD1-202ENST00000371117 SCAF1Q9H7N4 1312 aaKnown RBP6.52□□□□□ -1.37
PKHD1-202ENST00000371117 PPARGC1BQ86YN6 1023 aaKnown RBP6.52□□□□□ -1.37
PKHD1-202ENST00000371117 NAP1L5Q96NT1 182 aaPredicted RBP6.51□□□□□ -1.37
PKHD1-202ENST00000371117 PODXL2Q9NZ53 605 aa6.51□□□□□ -1.37
PKHD1-202ENST00000371117 L1TD1Q5T7N2 865 aaKnown RBP6.51□□□□□ -1.37
PKHD1-202ENST00000371117 PRKCSHP14314 528 aaPredicted RBP6.5□□□□□ -1.37
PKHD1-202ENST00000371117 NEUROD1Q13562 356 aa6.5□□□□□ -1.37
PKHD1-202ENST00000371117 TNNT3P45378 269 aaPredicted RBP6.48□□□□□ -1.37
PKHD1-202ENST00000371117 BECN1Q14457 450 aa6.48□□□□□ -1.37
PKHD1-202ENST00000371117 BCANQ96GW7 911 aa6.48□□□□□ -1.37
PKHD1-202ENST00000371117 GOLGA6L22H0YM25 854 aa6.47□□□□□ -1.37
PKHD1-202ENST00000371117 NBR1Q14596 966 aa6.47□□□□□ -1.37
PKHD1-202ENST00000371117 HSP90AA2PQ14568 343 aaPredicted RBP6.46□□□□□ -1.37
PKHD1-202ENST00000371117 DEKP35659 375 aaKnown RBP6.46□□□□□ -1.37
PKHD1-202ENST00000371117 TRIM41Q8WV44 630 aa6.46□□□□□ -1.38
PKHD1-202ENST00000371117 PKNOX2Q96KN3 472 aa6.46□□□□□ -1.38
PKHD1-202ENST00000371117 A0A0U1RQG5 324 aaPredicted RBP6.44□□□□□ -1.38
PKHD1-202ENST00000371117 CHAF1AQ13111 956 aaPredicted RBP6.43□□□□□ -1.38
PKHD1-202ENST00000371117 GOLGA6L3A6NEY3 463 aa6.42□□□□□ -1.38
PKHD1-202ENST00000371117 MTERF4Q7Z6M4 381 aaKnown RBP6.42□□□□□ -1.38
PKHD1-202ENST00000371117 USP35Q9P2H5 1018 aa6.41□□□□□ -1.38
PKHD1-202ENST00000371117 GOLGA6L6A8MZA4 724 aa6.41□□□□□ -1.38
PKHD1-202ENST00000371117 UBTFP17480 764 aaKnown RBP6.41□□□□□ -1.38
PKHD1-202ENST00000371117 FKBP8Q14318 412 aa6.41□□□□□ -1.38
PKHD1-202ENST00000371117 PNNQ9H307 717 aaKnown RBP6.41□□□□□ -1.38
PKHD1-202ENST00000371117 NOP58Q9Y2X3 529 aaKnown RBP6.4□□□□□ -1.38
PKHD1-202ENST00000371117 MAP7D2Q96T17 732 aa6.4□□□□□ -1.38
PKHD1-202ENST00000371117 APPP05067 770 aa6.4□□□□□ -1.39
PKHD1-202ENST00000371117 NRDCO43847 1150 aa6.38□□□□□ -1.39
PKHD1-202ENST00000371117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.38□□□□□ -1.39
PKHD1-202ENST00000371117 HNRNPUL2Q1KMD3 747 aaKnown RBP6.38□□□□□ -1.39
PKHD1-202ENST00000371117 VSIG10Q8N0Z9 540 aa6.38□□□□□ -1.39
PKHD1-202ENST00000371117 TAF3Q5VWG9 929 aa6.38□□□□□ -1.39
PKHD1-202ENST00000371117 HOMEZQ8IX15 550 aa6.38□□□□□ -1.39
PKHD1-202ENST00000371117 CCDC136Q96JN2 1154 aa6.37□□□□□ -1.39
PKHD1-202ENST00000371117 PTMAP06454 111 aaKnown RBP6.37□□□□□ -1.39
PKHD1-202ENST00000371117 DNTTIP2Q5QJE6 756 aaKnown RBP6.36□□□□□ -1.39
PKHD1-202ENST00000371117 NPM2Q86SE8 214 aaKnown RBP6.36□□□□□ -1.39
PKHD1-202ENST00000371117 MSNP26038 577 aaKnown RBP6.35□□□□□ -1.39
PKHD1-202ENST00000371117 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.35□□□□□ -1.39
PKHD1-202ENST00000371117 GOLGA6L1Q8N7Z2 621 aa6.34□□□□□ -1.39
PKHD1-202ENST00000371117 CHIC1Q5VXU3 224 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms