RNA–Protein interactions for RNA: ENST00000516127.1

RNA5SP249-201, Transcript of RNA, 5S ribosomal pseudogene 249, humanhuman

BASIC

Gene RNA5SP249, Length 99 nt, Biotype rRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP249-201ENST00000516127 NISCHQ9Y2I1 1504 aa9.98□□□□□ -0.81
RNA5SP249-201ENST00000516127 CCDC180Q9P1Z9 1646 aa8.47□□□□□ -1.05
RNA5SP249-201ENST00000516127 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
RNA5SP249-201ENST00000516127 DCAF8L2P0C7V8 631 aa8.43□□□□□ -1.06
RNA5SP249-201ENST00000516127 ZCCHC6Q5VYS8 1495 aaKnown RBP8.39□□□□□ -1.07
RNA5SP249-201ENST00000516127 SUPT5HO00267 1087 aaKnown RBP8.38□□□□□ -1.07
RNA5SP249-201ENST00000516127 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
RNA5SP249-201ENST00000516127 CHIC1Q5VXU3 224 aa8.13□□□□□ -1.11
RNA5SP249-201ENST00000516127 MYO15BQ96JP2 1530 aa8.03□□□□□ -1.12
RNA5SP249-201ENST00000516127 NACADO15069 1562 aa7.93□□□□□ -1.14
RNA5SP249-201ENST00000516127 RSF1Q96T23 1441 aaPredicted RBP7.89□□□□□ -1.15
RNA5SP249-201ENST00000516127 TRIM41Q8WV44 630 aa7.89□□□□□ -1.15
RNA5SP249-201ENST00000516127 SCRIBQ14160 1630 aa7.89□□□□□ -1.15
RNA5SP249-201ENST00000516127 ABCC9O60706 1549 aa7.88□□□□□ -1.15
RNA5SP249-201ENST00000516127 PCGF6Q9BYE7 350 aa7.86□□□□□ -1.15
RNA5SP249-201ENST00000516127 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
RNA5SP249-201ENST00000516127 HRCP23327 699 aa7.85□□□□□ -1.15
RNA5SP249-201ENST00000516127 RB1CC1Q8TDY2 1594 aa7.8□□□□□ -1.16
RNA5SP249-201ENST00000516127 TRIM26Q12899 539 aaPredicted RBP7.8□□□□□ -1.16
RNA5SP249-201ENST00000516127 ZEB1P37275 1124 aaPredicted RBP7.73□□□□□ -1.17
RNA5SP249-201ENST00000516127 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
RNA5SP249-201ENST00000516127 CECR2Q9BXF3 1484 aa7.73□□□□□ -1.17
RNA5SP249-201ENST00000516127 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
RNA5SP249-201ENST00000516127 BAZ1AQ9NRL2 1556 aaPredicted RBP7.69□□□□□ -1.18
RNA5SP249-201ENST00000516127 WIZO95785 1651 aa7.63□□□□□ -1.19
RNA5SP249-201ENST00000516127 EHMT2Q96KQ7 1210 aa7.61□□□□□ -1.19
RNA5SP249-201ENST00000516127 PABPN1Q86U42 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNA5SP249-201ENST00000516127 TOP2AP11388 1531 aaKnown RBP7.58□□□□□ -1.2
RNA5SP249-201ENST00000516127 SMARCA4P51532 1647 aa7.56□□□□□ -1.2
RNA5SP249-201ENST00000516127 CCDC88BA6NC98 1476 aa7.56□□□□□ -1.2
RNA5SP249-201ENST00000516127 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
RNA5SP249-201ENST00000516127 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
RNA5SP249-201ENST00000516127 EEA1Q15075 1411 aa7.54□□□□□ -1.2
RNA5SP249-201ENST00000516127 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
RNA5SP249-201ENST00000516127 TNIKQ9UKE5 1360 aa7.49□□□□□ -1.21
RNA5SP249-201ENST00000516127 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
RNA5SP249-201ENST00000516127 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
RNA5SP249-201ENST00000516127 UNC13AQ9UPW8 1703 aa7.47□□□□□ -1.21
RNA5SP249-201ENST00000516127 APLP2Q06481 763 aa7.46□□□□□ -1.22
RNA5SP249-201ENST00000516127 WRNQ14191 1432 aaPredicted RBP eCLIP7.45□□□□□ -1.22
RNA5SP249-201ENST00000516127 ABCC8Q09428 1581 aa7.44□□□□□ -1.22
RNA5SP249-201ENST00000516127 BICRAQ9NZM4 1560 aa7.44□□□□□ -1.22
RNA5SP249-201ENST00000516127 ATAD2BQ9ULI0 1458 aa7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 EIF4G1Q04637 1599 aaKnown RBP7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 PEG3Q9GZU2 1588 aa7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 SOGA1O94964 1423 aa7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 BAZ1BQ9UIG0 1483 aaKnown RBP7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 CEP162Q5TB80 1403 aa7.42□□□□□ -1.22
RNA5SP249-201ENST00000516127 GOLGA3Q08378 1498 aa7.42□□□□□ -1.22
RNA5SP249-201ENST00000516127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
RNA5SP249-201ENST00000516127 CEP164Q9UPV0 1460 aa7.38□□□□□ -1.23
RNA5SP249-201ENST00000516127 TTBK1Q5TCY1 1321 aaPredicted RBP7.36□□□□□ -1.23
RNA5SP249-201ENST00000516127 RUSC2Q8N2Y8 1516 aa7.35□□□□□ -1.23
RNA5SP249-201ENST00000516127 NCAPD3P42695 1498 aa7.34□□□□□ -1.23
RNA5SP249-201ENST00000516127 CLIP1P30622 1438 aa7.33□□□□□ -1.24
RNA5SP249-201ENST00000516127 KIF21BO75037 1637 aa7.3□□□□□ -1.24
RNA5SP249-201ENST00000516127 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
RNA5SP249-201ENST00000516127 HNRNPUL2Q1KMD3 747 aaKnown RBP7.29□□□□□ -1.24
RNA5SP249-201ENST00000516127 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
RNA5SP249-201ENST00000516127 SYNJ1O43426 1573 aa7.29□□□□□ -1.24
RNA5SP249-201ENST00000516127 VPS8Q8N3P4 1428 aa7.28□□□□□ -1.24
RNA5SP249-201ENST00000516127 KIF27Q86VH2 1401 aa7.27□□□□□ -1.24
RNA5SP249-201ENST00000516127 HMGXB3Q12766 1538 aa7.27□□□□□ -1.25
RNA5SP249-201ENST00000516127 ZNF316A6NFI3 1004 aaPredicted RBP7.27□□□□□ -1.25
RNA5SP249-201ENST00000516127 CENPBP07199 599 aaPredicted RBP7.27□□□□□ -1.25
RNA5SP249-201ENST00000516127 TOP2BQ02880 1626 aa7.26□□□□□ -1.25
RNA5SP249-201ENST00000516127 RAPGEF2Q9Y4G8 1499 aa7.24□□□□□ -1.25
RNA5SP249-201ENST00000516127 CFTRP13569 1480 aa7.24□□□□□ -1.25
RNA5SP249-201ENST00000516127 ERICH3Q5RHP9 1530 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 CADPSQ9ULU8 1353 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 PRXQ9BXM0 1461 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 CLSPNQ9HAW4 1339 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 BIVM-ERCC5R4GMW8 1640 aa7.21□□□□□ -1.26
RNA5SP249-201ENST00000516127 PELP1Q8IZL8 1130 aaKnown RBP7.21□□□□□ -1.26
RNA5SP249-201ENST00000516127 ACIN1Q9UKV3 1341 aaKnown RBP7.19□□□□□ -1.26
RNA5SP249-201ENST00000516127 CUX1P39880 1505 aa7.17□□□□□ -1.26
RNA5SP249-201ENST00000516127 IGF1RP08069 1367 aa7.17□□□□□ -1.26
RNA5SP249-201ENST00000516127 CARMIL1Q5VZK9 1371 aa7.17□□□□□ -1.26
RNA5SP249-201ENST00000516127 KANK4Q5T7N3 995 aaPredicted RBP7.15□□□□□ -1.26
RNA5SP249-201ENST00000516127 CUX2O14529 1486 aa7.15□□□□□ -1.27
RNA5SP249-201ENST00000516127 SCAF1Q9H7N4 1312 aaKnown RBP7.13□□□□□ -1.27
RNA5SP249-201ENST00000516127 ATP1B4Q9UN42 357 aaPredicted RBP7.13□□□□□ -1.27
RNA5SP249-201ENST00000516127 ARAP1Q96P48 1450 aa7.12□□□□□ -1.27
RNA5SP249-201ENST00000516127 FHAD1B1AJZ9 1412 aa7.11□□□□□ -1.27
RNA5SP249-201ENST00000516127 CCNB3Q8WWL7 1395 aa7.11□□□□□ -1.27
RNA5SP249-201ENST00000516127 ITGAEP38570 1179 aa7.11□□□□□ -1.27
RNA5SP249-201ENST00000516127 NEUROD1Q13562 356 aa7.1□□□□□ -1.27
RNA5SP249-201ENST00000516127 FANCD2Q9BXW9 1451 aa7.1□□□□□ -1.27
RNA5SP249-201ENST00000516127 RRBP1Q9P2E9 1410 aaKnown RBP7.1□□□□□ -1.27
RNA5SP249-201ENST00000516127 MAP3K1Q13233 1512 aa7.09□□□□□ -1.27
RNA5SP249-201ENST00000516127 FGD5Q6ZNL6 1462 aa7.09□□□□□ -1.27
RNA5SP249-201ENST00000516127 ARHGAP35Q9NRY4 1499 aa7.09□□□□□ -1.27
RNA5SP249-201ENST00000516127 FAM50AQ14320 339 aaKnown RBP7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 P3H3Q8IVL6 736 aa7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 MIER1Q8N108 512 aa7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 TIMELESSQ9UNS1 1208 aa7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 DHX57Q6P158 1386 aaKnown RBP7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 PRDM2Q13029 1718 aa7.07□□□□□ -1.28
RNA5SP249-201ENST00000516127 GTF3C3Q9Y5Q9 886 aa7.07□□□□□ -1.28
RNA5SP249-201ENST00000516127 CC2D2AQ9P2K1 1620 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms