RNA–Protein interactions for RNA: ENST00000516127.1

RNA5SP249-201, Transcript of RNA, 5S ribosomal pseudogene 249, humanhuman

BASIC

Gene RNA5SP249, Length 99 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP249-201ENST00000516127 NISCHQ9Y2I1 1504 aa9.98□□□□□ -0.81
RNA5SP249-201ENST00000516127 CCDC180Q9P1Z9 1646 aa8.47□□□□□ -1.05
RNA5SP249-201ENST00000516127 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
RNA5SP249-201ENST00000516127 DCAF8L2P0C7V8 631 aa8.43□□□□□ -1.06
RNA5SP249-201ENST00000516127 ZCCHC6Q5VYS8 1495 aaKnown RBP8.39□□□□□ -1.07
RNA5SP249-201ENST00000516127 SUPT5HO00267 1087 aaKnown RBP8.38□□□□□ -1.07
RNA5SP249-201ENST00000516127 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
RNA5SP249-201ENST00000516127 CHIC1Q5VXU3 224 aa8.13□□□□□ -1.11
RNA5SP249-201ENST00000516127 MYO15BQ96JP2 1530 aa8.03□□□□□ -1.12
RNA5SP249-201ENST00000516127 NACADO15069 1562 aa7.93□□□□□ -1.14
RNA5SP249-201ENST00000516127 RSF1Q96T23 1441 aaPredicted RBP7.89□□□□□ -1.15
RNA5SP249-201ENST00000516127 TRIM41Q8WV44 630 aa7.89□□□□□ -1.15
RNA5SP249-201ENST00000516127 SCRIBQ14160 1630 aa7.89□□□□□ -1.15
RNA5SP249-201ENST00000516127 ABCC9O60706 1549 aa7.88□□□□□ -1.15
RNA5SP249-201ENST00000516127 PCGF6Q9BYE7 350 aa7.86□□□□□ -1.15
RNA5SP249-201ENST00000516127 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
RNA5SP249-201ENST00000516127 HRCP23327 699 aa7.85□□□□□ -1.15
RNA5SP249-201ENST00000516127 RB1CC1Q8TDY2 1594 aa7.8□□□□□ -1.16
RNA5SP249-201ENST00000516127 TRIM26Q12899 539 aaPredicted RBP7.8□□□□□ -1.16
RNA5SP249-201ENST00000516127 ZEB1P37275 1124 aaPredicted RBP7.73□□□□□ -1.17
RNA5SP249-201ENST00000516127 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
RNA5SP249-201ENST00000516127 CECR2Q9BXF3 1484 aa7.73□□□□□ -1.17
RNA5SP249-201ENST00000516127 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
RNA5SP249-201ENST00000516127 BAZ1AQ9NRL2 1556 aaPredicted RBP7.69□□□□□ -1.18
RNA5SP249-201ENST00000516127 WIZO95785 1651 aa7.63□□□□□ -1.19
RNA5SP249-201ENST00000516127 EHMT2Q96KQ7 1210 aa7.61□□□□□ -1.19
RNA5SP249-201ENST00000516127 PABPN1Q86U42 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNA5SP249-201ENST00000516127 TOP2AP11388 1531 aaKnown RBP7.58□□□□□ -1.2
RNA5SP249-201ENST00000516127 SMARCA4P51532 1647 aa7.56□□□□□ -1.2
RNA5SP249-201ENST00000516127 CCDC88BA6NC98 1476 aa7.56□□□□□ -1.2
RNA5SP249-201ENST00000516127 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
RNA5SP249-201ENST00000516127 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
RNA5SP249-201ENST00000516127 EEA1Q15075 1411 aa7.54□□□□□ -1.2
RNA5SP249-201ENST00000516127 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
RNA5SP249-201ENST00000516127 TNIKQ9UKE5 1360 aa7.49□□□□□ -1.21
RNA5SP249-201ENST00000516127 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
RNA5SP249-201ENST00000516127 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
RNA5SP249-201ENST00000516127 UNC13AQ9UPW8 1703 aa7.47□□□□□ -1.21
RNA5SP249-201ENST00000516127 APLP2Q06481 763 aa7.46□□□□□ -1.22
RNA5SP249-201ENST00000516127 WRNQ14191 1432 aaPredicted RBP eCLIP7.45□□□□□ -1.22
RNA5SP249-201ENST00000516127 ABCC8Q09428 1581 aa7.44□□□□□ -1.22
RNA5SP249-201ENST00000516127 BICRAQ9NZM4 1560 aa7.44□□□□□ -1.22
RNA5SP249-201ENST00000516127 ATAD2BQ9ULI0 1458 aa7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 EIF4G1Q04637 1599 aaKnown RBP7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 PEG3Q9GZU2 1588 aa7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 SOGA1O94964 1423 aa7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 BAZ1BQ9UIG0 1483 aaKnown RBP7.43□□□□□ -1.22
RNA5SP249-201ENST00000516127 CEP162Q5TB80 1403 aa7.42□□□□□ -1.22
RNA5SP249-201ENST00000516127 GOLGA3Q08378 1498 aa7.42□□□□□ -1.22
RNA5SP249-201ENST00000516127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
RNA5SP249-201ENST00000516127 CEP164Q9UPV0 1460 aa7.38□□□□□ -1.23
RNA5SP249-201ENST00000516127 TTBK1Q5TCY1 1321 aaPredicted RBP7.36□□□□□ -1.23
RNA5SP249-201ENST00000516127 RUSC2Q8N2Y8 1516 aa7.35□□□□□ -1.23
RNA5SP249-201ENST00000516127 NCAPD3P42695 1498 aa7.34□□□□□ -1.23
RNA5SP249-201ENST00000516127 CLIP1P30622 1438 aa7.33□□□□□ -1.24
RNA5SP249-201ENST00000516127 KIF21BO75037 1637 aa7.3□□□□□ -1.24
RNA5SP249-201ENST00000516127 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
RNA5SP249-201ENST00000516127 HNRNPUL2Q1KMD3 747 aaKnown RBP7.29□□□□□ -1.24
RNA5SP249-201ENST00000516127 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
RNA5SP249-201ENST00000516127 SYNJ1O43426 1573 aa7.29□□□□□ -1.24
RNA5SP249-201ENST00000516127 VPS8Q8N3P4 1428 aa7.28□□□□□ -1.24
RNA5SP249-201ENST00000516127 KIF27Q86VH2 1401 aa7.27□□□□□ -1.24
RNA5SP249-201ENST00000516127 HMGXB3Q12766 1538 aa7.27□□□□□ -1.25
RNA5SP249-201ENST00000516127 ZNF316A6NFI3 1004 aaPredicted RBP7.27□□□□□ -1.25
RNA5SP249-201ENST00000516127 CENPBP07199 599 aaPredicted RBP7.27□□□□□ -1.25
RNA5SP249-201ENST00000516127 TOP2BQ02880 1626 aa7.26□□□□□ -1.25
RNA5SP249-201ENST00000516127 RAPGEF2Q9Y4G8 1499 aa7.24□□□□□ -1.25
RNA5SP249-201ENST00000516127 CFTRP13569 1480 aa7.24□□□□□ -1.25
RNA5SP249-201ENST00000516127 ERICH3Q5RHP9 1530 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 CADPSQ9ULU8 1353 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 PRXQ9BXM0 1461 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 CLSPNQ9HAW4 1339 aa7.22□□□□□ -1.25
RNA5SP249-201ENST00000516127 BIVM-ERCC5R4GMW8 1640 aa7.21□□□□□ -1.26
RNA5SP249-201ENST00000516127 PELP1Q8IZL8 1130 aaKnown RBP7.21□□□□□ -1.26
RNA5SP249-201ENST00000516127 ACIN1Q9UKV3 1341 aaKnown RBP7.19□□□□□ -1.26
RNA5SP249-201ENST00000516127 CUX1P39880 1505 aa7.17□□□□□ -1.26
RNA5SP249-201ENST00000516127 IGF1RP08069 1367 aa7.17□□□□□ -1.26
RNA5SP249-201ENST00000516127 CARMIL1Q5VZK9 1371 aa7.17□□□□□ -1.26
RNA5SP249-201ENST00000516127 KANK4Q5T7N3 995 aaPredicted RBP7.15□□□□□ -1.26
RNA5SP249-201ENST00000516127 CUX2O14529 1486 aa7.15□□□□□ -1.27
RNA5SP249-201ENST00000516127 SCAF1Q9H7N4 1312 aaKnown RBP7.13□□□□□ -1.27
RNA5SP249-201ENST00000516127 ATP1B4Q9UN42 357 aaPredicted RBP7.13□□□□□ -1.27
RNA5SP249-201ENST00000516127 ARAP1Q96P48 1450 aa7.12□□□□□ -1.27
RNA5SP249-201ENST00000516127 FHAD1B1AJZ9 1412 aa7.11□□□□□ -1.27
RNA5SP249-201ENST00000516127 CCNB3Q8WWL7 1395 aa7.11□□□□□ -1.27
RNA5SP249-201ENST00000516127 ITGAEP38570 1179 aa7.11□□□□□ -1.27
RNA5SP249-201ENST00000516127 NEUROD1Q13562 356 aa7.1□□□□□ -1.27
RNA5SP249-201ENST00000516127 FANCD2Q9BXW9 1451 aa7.1□□□□□ -1.27
RNA5SP249-201ENST00000516127 RRBP1Q9P2E9 1410 aaKnown RBP7.1□□□□□ -1.27
RNA5SP249-201ENST00000516127 MAP3K1Q13233 1512 aa7.09□□□□□ -1.27
RNA5SP249-201ENST00000516127 FGD5Q6ZNL6 1462 aa7.09□□□□□ -1.27
RNA5SP249-201ENST00000516127 ARHGAP35Q9NRY4 1499 aa7.09□□□□□ -1.27
RNA5SP249-201ENST00000516127 FAM50AQ14320 339 aaKnown RBP7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 P3H3Q8IVL6 736 aa7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 MIER1Q8N108 512 aa7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 TIMELESSQ9UNS1 1208 aa7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 DHX57Q6P158 1386 aaKnown RBP7.08□□□□□ -1.28
RNA5SP249-201ENST00000516127 PRDM2Q13029 1718 aa7.07□□□□□ -1.28
RNA5SP249-201ENST00000516127 GTF3C3Q9Y5Q9 886 aa7.07□□□□□ -1.28
RNA5SP249-201ENST00000516127 CC2D2AQ9P2K1 1620 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms