Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 HBZP1-201ENST00000354915 429 ntBASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 MCCD1P1-208ENST00000445732 328 ntBASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 RASA4DP-201ENST00000460726 1199 ntBASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 MIR3180-5-201ENST00000583743 153 ntBASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.43■□□□□ 0.54
CSNK1G3Q9Y6M4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1G3Q9Y6M4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms