Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 FAM87A-204ENST00000613235 858 ntBASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 AC022616.7-201ENST00000525383 220 ntBASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB1Q9Y5F3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 UPK3BP1-201ENST00000428678 509 ntBASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 AC091390.4-202ENST00000476426 537 ntBASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB1Q9Y5F3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 KRT8P11-201ENST00000409686 1436 ntBASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 AC006333.2-201ENST00000607957 2099 ntBASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
PCDHB1Q9Y5F3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 AC128688.1-201ENST00000487626 519 ntBASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 AC011298.2-201ENST00000617989 482 ntBASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 AL358472.4-201ENST00000633140 710 ntBASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB1Q9Y5F3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms