Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 ZNF815P-204ENST00000434898 1737 ntBASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 GCSHP2-201ENST00000560971 527 ntBASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 AC069148.1-201ENST00000608741 768 ntBASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.24■□□□□ 0.83
SSX2IPQ9Y2D8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 KRT18P48-201ENST00000434763 852 ntBASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX2IPQ9Y2D8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 AC034232.1-201ENST00000506026 1064 ntBASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 KRT126P-201ENST00000549467 1181 ntBASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 AC093458.2-201ENST00000623150 629 ntBASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX2IPQ9Y2D8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSX2IPQ9Y2D8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms