Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 AC005332.3-201ENST00000589904 676 ntBASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 LINC01711-201ENST00000598340 967 ntBASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 AL390719.2-201ENST00000606993 987 ntBASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 SLC25A24-204ENST00000569674 2357 ntBASIC29.09■■■□□ 2.25
CDK11AQ9UQ88 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 AP003733.1-201ENST00000491725 852 ntBASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 AC104692.2-201ENST00000603054 253 ntBASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 UBC-206ENST00000538617 1303 ntTSL 5 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 KRT8P32-201ENST00000512863 1461 ntBASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC29.08■■■□□ 2.25
CDK11AQ9UQ88 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.24
CDK11AQ9UQ88 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 KRT18P31-201ENST00000506277 1292 ntBASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDK11AQ9UQ88 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 FOSL1P1-201ENST00000511041 816 ntBASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 AL031008.1-201ENST00000619963 541 ntBASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CDK11AQ9UQ88 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 AC104819.1-201ENST00000504587 486 ntBASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 AL160237.2-201ENST00000556165 472 ntBASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 AC034236.2-201ENST00000606662 1610 ntBASIC29.05■■■□□ 2.24
CDK11AQ9UQ88 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDK11AQ9UQ88 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms