Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 TSPY21P-201ENST00000433481 731 ntBASIC16.8■□□□□ 0.28
COPS3Q9UNS2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 UNC93B4-201ENST00000505679 747 ntBASIC16.8■□□□□ 0.28
COPS3Q9UNS2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COPS3Q9UNS2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 AC069152.1-201ENST00000438030 544 ntBASIC16.79■□□□□ 0.28
COPS3Q9UNS2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 AL160286.2-201ENST00000567150 934 ntBASIC16.79■□□□□ 0.28
COPS3Q9UNS2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms