Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 AC027612.3-201ENST00000413684 1047 ntBASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 AC004854.2-201ENST00000608450 1441 ntBASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD3Q9UBI1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 KRT18P68-201ENST00000392293 1000 ntBASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 TERF1P5-201ENST00000477545 1207 ntBASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD3Q9UBI1 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
COMMD3Q9UBI1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COMMD3Q9UBI1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 TFP1-202ENST00000475455 1573 ntBASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms