Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 AC008764.6-201ENST00000595909 2069 ntBASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 AC211429.1-201ENST00000415277 523 ntBASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 AC010331.1-201ENST00000611423 582 ntBASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2LQ9NUG4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 REXO1L12P-201ENST00000622156 912 ntBASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2LQ9NUG4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 AIRN-201ENST00000601203 4374 ntBASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 RPPH1-201ENST00000516869 333 ntBASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 C1QBPP2-201ENST00000528754 825 ntBASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2LQ9NUG4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms