Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 KRT18P16-201ENST00000510337 1294 ntBASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 IRX1P1-201ENST00000438849 1838 ntBASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 PNMA6B-201ENST00000538162 1200 ntBASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 AL138781.1-201ENST00000566567 1274 ntBASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 AC120498.8-201ENST00000614275 531 ntBASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB16Q9NRJ7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 GUSBP6-202ENST00000438529 1198 ntBASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 AC104771.1-201ENST00000603335 964 ntBASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 AC133041.1-202ENST00000642053 222 ntBASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB16Q9NRJ7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms