Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.65■□□□□ 0.74
DDX47Q9H0S4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 AC060766.5-201ENST00000590539 871 ntBASIC19.65■□□□□ 0.74
DDX47Q9H0S4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DDX47Q9H0S4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.64■□□□□ 0.74
DDX47Q9H0S4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DDX47Q9H0S4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.64■□□□□ 0.73
DDX47Q9H0S4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX47Q9H0S4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 AC097658.1-201ENST00000475555 843 ntBASIC19.63■□□□□ 0.73
DDX47Q9H0S4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 SOX15-203ENST00000570788 1093 ntBASIC19.63■□□□□ 0.73
DDX47Q9H0S4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.63■□□□□ 0.73
DDX47Q9H0S4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 HEIH-201ENST00000623091 1652 ntBASIC19.62■□□□□ 0.73
DDX47Q9H0S4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 AC006970.2-201ENST00000450065 779 ntBASIC19.62■□□□□ 0.73
DDX47Q9H0S4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms