Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 AL512353.2-201ENST00000448759 1962 ntBASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 AC007663.1-201ENST00000438948 1240 ntBASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCM2Q9BSQ5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 AC120498.9-201ENST00000339021 3867 ntBASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 INGX-201ENST00000359239 846 ntBASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 AP003041.3-201ENST00000527151 707 ntBASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCM2Q9BSQ5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 KRT8P32-201ENST00000512863 1461 ntBASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 ECEL1P3-201ENST00000427961 737 ntBASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2Q9BSQ5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2Q9BSQ5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms