Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LITAFQ99732 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.55□□□□□ -0.4
LITAFQ99732 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.55□□□□□ -0.4
LITAFQ99732 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.55□□□□□ -0.4
LITAFQ99732 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 EDA-201ENST00000338901 1233 ntBASIC12.55□□□□□ -0.4
LITAFQ99732 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 KRT18P68-201ENST00000392293 1000 ntBASIC12.55□□□□□ -0.4
LITAFQ99732 AC091305.1-201ENST00000479476 895 ntBASIC12.55□□□□□ -0.4
LITAFQ99732 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.55□□□□□ -0.4
LITAFQ99732 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.55□□□□□ -0.4
LITAFQ99732 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LITAFQ99732 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.55□□□□□ -0.4
LITAFQ99732 REXO1L9P-201ENST00000604264 2108 ntBASIC12.55□□□□□ -0.4
LITAFQ99732 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LITAFQ99732 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LITAFQ99732 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.54□□□□□ -0.4
LITAFQ99732 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 AC090340.1-201ENST00000620778 4980 ntBASIC12.54□□□□□ -0.4
LITAFQ99732 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LITAFQ99732 AC046158.3-201ENST00000624947 2558 ntBASIC12.54□□□□□ -0.4
LITAFQ99732 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LITAFQ99732 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 NME4-202ENST00000382940 766 ntTSL 3 BASIC12.54□□□□□ -0.4
LITAFQ99732 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.54□□□□□ -0.4
LITAFQ99732 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC12.54□□□□□ -0.4
LITAFQ99732 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC12.54□□□□□ -0.4
LITAFQ99732 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.54□□□□□ -0.4
LITAFQ99732 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC12.54□□□□□ -0.4
LITAFQ99732 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 AF213884.3-201ENST00000563833 479 ntBASIC12.54□□□□□ -0.4
LITAFQ99732 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC12.54□□□□□ -0.4
LITAFQ99732 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 NME4-211ENST00000620944 1193 ntTSL 2 BASIC12.54□□□□□ -0.4
LITAFQ99732 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.54□□□□□ -0.4
LITAFQ99732 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LITAFQ99732 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LITAFQ99732 HEIH-201ENST00000623091 1652 ntBASIC12.54□□□□□ -0.4
LITAFQ99732 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.54□□□□□ -0.4
LITAFQ99732 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LITAFQ99732 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LITAFQ99732 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms