Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TWNKQ96RR1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TWNKQ96RR1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TWNKQ96RR1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20■□□□□ 0.79
TWNKQ96RR1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TWNKQ96RR1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20■□□□□ 0.79
TWNKQ96RR1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TWNKQ96RR1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TWNKQ96RR1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
TWNKQ96RR1 AL109659.2-201ENST00000606809 1674 ntBASIC20■□□□□ 0.79
TWNKQ96RR1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20■□□□□ 0.79
TWNKQ96RR1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20■□□□□ 0.79
TWNKQ96RR1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TWNKQ96RR1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TWNKQ96RR1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TWNKQ96RR1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TWNKQ96RR1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20■□□□□ 0.79
TWNKQ96RR1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TWNKQ96RR1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.99■□□□□ 0.79
TWNKQ96RR1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 TNXA-203ENST00000507684 2038 ntBASIC19.99■□□□□ 0.79
TWNKQ96RR1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.99■□□□□ 0.79
TWNKQ96RR1 MCCD1P1-208ENST00000445732 328 ntBASIC19.99■□□□□ 0.79
TWNKQ96RR1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TWNKQ96RR1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 RCN1P1-201ENST00000400413 996 ntBASIC19.98■□□□□ 0.79
TWNKQ96RR1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 KRT18P57-201ENST00000443599 1254 ntBASIC19.98■□□□□ 0.79
TWNKQ96RR1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TWNKQ96RR1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TWNKQ96RR1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.98■□□□□ 0.79
TWNKQ96RR1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.97■□□□□ 0.79
TWNKQ96RR1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TWNKQ96RR1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TWNKQ96RR1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TWNKQ96RR1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.97■□□□□ 0.79
TWNKQ96RR1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.97■□□□□ 0.79
TWNKQ96RR1 AL138966.2-201ENST00000621997 464 ntBASIC19.97■□□□□ 0.79
TWNKQ96RR1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.97■□□□□ 0.79
TWNKQ96RR1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TWNKQ96RR1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TWNKQ96RR1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TWNKQ96RR1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.96■□□□□ 0.79
TWNKQ96RR1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.96■□□□□ 0.79
TWNKQ96RR1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.96■□□□□ 0.79
TWNKQ96RR1 AL357033.4-201ENST00000617703 1807 ntBASIC19.96■□□□□ 0.79
TWNKQ96RR1 AC093503.3-201ENST00000624917 2352 ntBASIC19.96■□□□□ 0.79
TWNKQ96RR1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TWNKQ96RR1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms