Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.29■□□□□ 0.52
NCLNQ969V3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NCLNQ969V3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NCLNQ969V3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 YBX1P10-201ENST00000444752 975 ntBASIC18.29■□□□□ 0.52
NCLNQ969V3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NCLNQ969V3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
NCLNQ969V3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NCLNQ969V3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.29■□□□□ 0.52
NCLNQ969V3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NCLNQ969V3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCLNQ969V3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 TEX21P-204ENST00000641479 1693 ntBASIC18.28■□□□□ 0.52
NCLNQ969V3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 MIR718-201ENST00000390190 70 ntBASIC18.28■□□□□ 0.52
NCLNQ969V3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.28■□□□□ 0.52
NCLNQ969V3 Z99916.2-201ENST00000604037 246 ntBASIC18.28■□□□□ 0.52
NCLNQ969V3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.28■□□□□ 0.52
NCLNQ969V3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.28■□□□□ 0.52
NCLNQ969V3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NCLNQ969V3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCLNQ969V3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
NCLNQ969V3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NCLNQ969V3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.27■□□□□ 0.52
NCLNQ969V3 HTR7P1-201ENST00000538670 1336 ntBASIC18.27■□□□□ 0.52
NCLNQ969V3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
NCLNQ969V3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.27■□□□□ 0.52
NCLNQ969V3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.27■□□□□ 0.52
NCLNQ969V3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.27■□□□□ 0.52
NCLNQ969V3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NCLNQ969V3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.27■□□□□ 0.52
NCLNQ969V3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NCLNQ969V3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.27■□□□□ 0.52
NCLNQ969V3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.27■□□□□ 0.52
NCLNQ969V3 RARRES2P10-201ENST00000564312 460 ntBASIC18.27■□□□□ 0.52
NCLNQ969V3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NCLNQ969V3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.27■□□□□ 0.52
NCLNQ969V3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 AC141586.3-201ENST00000562166 1838 ntBASIC18.27■□□□□ 0.52
NCLNQ969V3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NCLNQ969V3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCLNQ969V3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
NCLNQ969V3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
NCLNQ969V3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCLNQ969V3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms