Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 PRKY-204ENST00000533551 1019 ntBASIC16.95■□□□□ 0.3
PTP4A1Q93096 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.95■□□□□ 0.3
PTP4A1Q93096 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.95■□□□□ 0.3
PTP4A1Q93096 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTP4A1Q93096 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTP4A1Q93096 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PTP4A1Q93096 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTP4A1Q93096 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.95■□□□□ 0.3
PTP4A1Q93096 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 NBPF21P-201ENST00000425093 1451 ntBASIC16.94■□□□□ 0.3
PTP4A1Q93096 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 C1QL1P1-201ENST00000568105 661 ntBASIC16.94■□□□□ 0.3
PTP4A1Q93096 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 KRT8P41-201ENST00000533985 1514 ntBASIC16.94■□□□□ 0.3
PTP4A1Q93096 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTP4A1Q93096 NOC2LP2-201ENST00000407594 1944 ntBASIC16.94■□□□□ 0.3
PTP4A1Q93096 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PTP4A1Q93096 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTP4A1Q93096 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PTP4A1Q93096 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 POU5F1P3-201ENST00000428824 1078 ntBASIC16.92■□□□□ 0.3
PTP4A1Q93096 FAM201B-201ENST00000458407 597 ntBASIC16.92■□□□□ 0.3
PTP4A1Q93096 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PTP4A1Q93096 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 ABALON-201ENST00000629058 1903 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms