Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 AL499627.1-201ENST00000569373 2188 ntBASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 PRKY-204ENST00000533551 1019 ntBASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 AC068587.9-201ENST00000641814 219 ntBASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC44A1Q8WWI5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC44A1Q8WWI5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC44A1Q8WWI5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC44A1Q8WWI5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC44A1Q8WWI5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.89■□□□□ 0.62
SLC44A1Q8WWI5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC44A1Q8WWI5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 AC067852.2-201ENST00000590513 2313 ntBASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 POU5F1P3-201ENST00000428824 1078 ntBASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 AC069152.1-201ENST00000438030 544 ntBASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 AC133041.1-202ENST00000642053 222 ntBASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms