Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 RARRES2P10-201ENST00000564312 460 ntBASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 CR392000.1-201ENST00000624770 1228 ntBASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 OR6D1P-202ENST00000641007 5290 ntBASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP1Q8TDR0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 AC083906.6-201ENST00000641366 219 ntBASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 Z98044.1-201ENST00000632503 1764 ntBASIC19.65■□□□□ 0.74
TRAF3IP1Q8TDR0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRAF3IP1Q8TDR0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 AF186192.3-201ENST00000583427 947 ntBASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 AC073195.1-201ENST00000607241 877 ntBASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 AL031985.4-201ENST00000642138 673 ntBASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 AC093525.10-201ENST00000625130 1569 ntBASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP1Q8TDR0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms