Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 TSPY21P-201ENST00000433481 731 ntBASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AP003071.4-201ENST00000562276 1284 ntBASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AP001412.1-201ENST00000608405 714 ntBASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AC093503.3-201ENST00000624917 2352 ntBASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 AC120498.9-201ENST00000339021 3867 ntBASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIMC1Q8NDZ2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 MIR718-201ENST00000390190 70 ntBASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIMC1Q8NDZ2 FSCN1P1-201ENST00000568912 1481 ntBASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 AL355355.2-201ENST00000442321 338 ntBASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 FAM207BP-201ENST00000447172 505 ntBASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIMC1Q8NDZ2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 AL355075.4-201ENST00000554988 638 ntBASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 MIR4497-201ENST00000583208 89 ntBASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms