Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 AL359736.2-201ENST00000621992 437 ntBASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 CR392000.1-201ENST00000624770 1228 ntBASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNAAF3Q8N9W5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 AC093525.10-201ENST00000625130 1569 ntBASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 AC083906.6-201ENST00000641366 219 ntBASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF3Q8N9W5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 KRT8P11-201ENST00000409686 1436 ntBASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 RARRES2P10-201ENST00000564312 460 ntBASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 AF186192.3-201ENST00000583427 947 ntBASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.19■□□□□ 0.66
DNAAF3Q8N9W5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 AC004951.3-201ENST00000418645 1148 ntBASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 AL031985.4-201ENST00000642138 673 ntBASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF3Q8N9W5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms