Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 AC073592.3-201ENST00000625118 1834 ntBASIC18.44■□□□□ 0.54
CPSF7Q8N684 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 AL390719.1-204ENST00000412397 1219 ntBASIC18.43■□□□□ 0.54
CPSF7Q8N684 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 AC138932.1-201ENST00000534164 6830 ntBASIC18.43■□□□□ 0.54
CPSF7Q8N684 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CPSF7Q8N684 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPSF7Q8N684 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 AL596275.1-201ENST00000423464 877 ntBASIC18.42■□□□□ 0.54
CPSF7Q8N684 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 AC120498.8-201ENST00000614275 531 ntBASIC18.42■□□□□ 0.54
CPSF7Q8N684 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPSF7Q8N684 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CPSF7Q8N684 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.41■□□□□ 0.54
CPSF7Q8N684 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms