Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 AC133561.5-201ENST00000635547 218 ntBASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.83■□□□□ 0.76
SCUBE3Q8IX30 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 ECEL1P2-202ENST00000465689 757 ntBASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.82■□□□□ 0.76
SCUBE3Q8IX30 KRT8P32-201ENST00000512863 1461 ntBASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 GPAT2P1-201ENST00000444924 1672 ntBASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SCUBE3Q8IX30 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 AC128688.1-201ENST00000487626 519 ntBASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 TNXA-203ENST00000507684 2038 ntBASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.8■□□□□ 0.76
SCUBE3Q8IX30 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms