Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB1Q86U70 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LDB1Q86U70 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDB1Q86U70 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDB1Q86U70 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.83■□□□□ 0.6
LDB1Q86U70 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.82■□□□□ 0.6
LDB1Q86U70 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 AC093525.10-201ENST00000625130 1569 ntBASIC18.82■□□□□ 0.6
LDB1Q86U70 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LDB1Q86U70 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.82■□□□□ 0.6
LDB1Q86U70 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LDB1Q86U70 TSPY7P-201ENST00000431358 1114 ntBASIC18.82■□□□□ 0.6
LDB1Q86U70 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.82■□□□□ 0.6
LDB1Q86U70 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.82■□□□□ 0.6
LDB1Q86U70 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.82■□□□□ 0.6
LDB1Q86U70 CKBP1-201ENST00000565489 1086 ntBASIC18.82■□□□□ 0.6
LDB1Q86U70 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.82■□□□□ 0.6
LDB1Q86U70 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.82■□□□□ 0.6
LDB1Q86U70 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.82■□□□□ 0.6
LDB1Q86U70 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 WIZP1-201ENST00000531444 2299 ntBASIC18.82■□□□□ 0.6
LDB1Q86U70 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LDB1Q86U70 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
LDB1Q86U70 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
LDB1Q86U70 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LDB1Q86U70 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LDB1Q86U70 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB1Q86U70 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.81■□□□□ 0.6
LDB1Q86U70 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LDB1Q86U70 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.81■□□□□ 0.6
LDB1Q86U70 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.81■□□□□ 0.6
LDB1Q86U70 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LDB1Q86U70 AP000692.2-201ENST00000608391 879 ntBASIC18.81■□□□□ 0.6
LDB1Q86U70 REXO1L10P-201ENST00000615707 1290 ntBASIC18.81■□□□□ 0.6
LDB1Q86U70 REXO1L12P-201ENST00000622156 912 ntBASIC18.81■□□□□ 0.6
LDB1Q86U70 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.81■□□□□ 0.6
LDB1Q86U70 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.81■□□□□ 0.6
LDB1Q86U70 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDB1Q86U70 Z98044.1-201ENST00000632503 1764 ntBASIC18.81■□□□□ 0.6
LDB1Q86U70 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LDB1Q86U70 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.8■□□□□ 0.6
LDB1Q86U70 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LDB1Q86U70 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LDB1Q86U70 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LDB1Q86U70 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 AC116562.2-201ENST00000507042 360 ntBASIC18.8■□□□□ 0.6
LDB1Q86U70 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.8■□□□□ 0.6
LDB1Q86U70 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LDB1Q86U70 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.8■□□□□ 0.6
LDB1Q86U70 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.8■□□□□ 0.6
LDB1Q86U70 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.8■□□□□ 0.6
LDB1Q86U70 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LDB1Q86U70 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms