Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 SLC25A1P2-201ENST00000430693 912 ntBASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 AP000525.1-201ENST00000608286 694 ntBASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 AL023284.2-201ENST00000405850 579 ntBASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 AL357033.4-201ENST00000617703 1807 ntBASIC16.22■□□□□ 0.19
COLCA1Q6ZS62 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COLCA1Q6ZS62 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COLCA1Q6ZS62 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.21■□□□□ 0.18
COLCA1Q6ZS62 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.21■□□□□ 0.18
COLCA1Q6ZS62 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 WIZP1-201ENST00000531444 2299 ntBASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms