Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 AP002383.4-201ENST00000442518 975 ntBASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 AC034232.1-201ENST00000506026 1064 ntBASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.02■■□□□ 1.12
SHROOM1Q2M3G4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.02■■□□□ 1.11
SHROOM1Q2M3G4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SHROOM1Q2M3G4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 MIR3180-1-201ENST00000580374 94 ntBASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 MIR3180-3-201ENST00000584616 94 ntBASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 AL109659.2-201ENST00000606809 1674 ntBASIC22.01■■□□□ 1.11
SHROOM1Q2M3G4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 AL450487.1-201ENST00000426799 995 ntBASIC22■■□□□ 1.11
SHROOM1Q2M3G4 HLA-F-220ENST00000434407 884 ntBASIC22■■□□□ 1.11
SHROOM1Q2M3G4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 RNF126P1-202ENST00000569893 925 ntBASIC22■■□□□ 1.11
SHROOM1Q2M3G4 AC011498.5-201ENST00000592027 486 ntBASIC22■■□□□ 1.11
SHROOM1Q2M3G4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 FEM1AP3-201ENST00000403722 1741 ntBASIC22■■□□□ 1.11
SHROOM1Q2M3G4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22■■□□□ 1.11
SHROOM1Q2M3G4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 AL162741.1-201ENST00000565563 1558 ntBASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 MIR3917-201ENST00000580971 93 ntBASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 AL391807.1-203ENST00000604392 2365 ntBASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.99■■□□□ 1.11
SHROOM1Q2M3G4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 AC093484.2-201ENST00000580996 2166 ntBASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM1Q2M3G4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 KRT8P32-201ENST00000512863 1461 ntBASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 AC141586.3-201ENST00000562166 1838 ntBASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 KRT18P23-201ENST00000435622 1283 ntBASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 AL136038.4-201ENST00000603606 1261 ntBASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms