Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CBX1P83916 AL136379.1-201ENST00000623471 2642 ntBASIC19.77■□□□□ 0.76
CBX1P83916 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX1P83916 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX1P83916 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CBX1P83916 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CBX1P83916 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CBX1P83916 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX1P83916 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX1P83916 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX1P83916 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX1P83916 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 AP001271.2-201ENST00000624018 1556 ntBASIC19.76■□□□□ 0.75
CBX1P83916 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CBX1P83916 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX1P83916 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.76■□□□□ 0.75
CBX1P83916 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CBX1P83916 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CBX1P83916 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CBX1P83916 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX1P83916 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CBX1P83916 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX1P83916 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX1P83916 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.75■□□□□ 0.75
CBX1P83916 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 AL031848.2-201ENST00000607670 837 ntBASIC19.75■□□□□ 0.75
CBX1P83916 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CBX1P83916 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.75■□□□□ 0.75
CBX1P83916 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX1P83916 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.74■□□□□ 0.75
CBX1P83916 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX1P83916 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CBX1P83916 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
CBX1P83916 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.74■□□□□ 0.75
CBX1P83916 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CBX1P83916 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CBX1P83916 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX1P83916 AC241377.3-202ENST00000626088 1088 ntBASIC19.74■□□□□ 0.75
CBX1P83916 AC241585.3-202ENST00000628937 1088 ntBASIC19.74■□□□□ 0.75
CBX1P83916 AC245100.8-202ENST00000629247 1058 ntBASIC19.74■□□□□ 0.75
CBX1P83916 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CBX1P83916 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.74■□□□□ 0.75
CBX1P83916 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CBX1P83916 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX1P83916 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX1P83916 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX1P83916 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX1P83916 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CBX1P83916 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CBX1P83916 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.73■□□□□ 0.75
CBX1P83916 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms