Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.02□□□□□ -0.33
RPL13AP40429 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RPL13AP40429 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.02□□□□□ -0.33
RPL13AP40429 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.02□□□□□ -0.33
RPL13AP40429 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.01□□□□□ -0.33
RPL13AP40429 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 AC097376.2-205ENST00000610159 5334 ntBASIC13.01□□□□□ -0.33
RPL13AP40429 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.01□□□□□ -0.33
RPL13AP40429 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.01□□□□□ -0.33
RPL13AP40429 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 AP004607.4-201ENST00000530158 1459 ntBASIC13.01□□□□□ -0.33
RPL13AP40429 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.01□□□□□ -0.33
RPL13AP40429 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL13AP40429 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.01□□□□□ -0.33
RPL13AP40429 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL13AP40429 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RPL13AP40429 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RPL13AP40429 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL13AP40429 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RPL13AP40429 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL13AP40429 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL13AP40429 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL13AP40429 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RPL13AP40429 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RPL13AP40429 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
RPL13AP40429 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13□□□□□ -0.33
RPL13AP40429 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13□□□□□ -0.33
RPL13AP40429 AC097381.1-201ENST00000429019 1296 ntBASIC13□□□□□ -0.33
RPL13AP40429 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13□□□□□ -0.33
RPL13AP40429 MIR6821-201ENST00000617625 74 ntBASIC13□□□□□ -0.33
RPL13AP40429 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RPL13AP40429 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RPL13AP40429 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL13AP40429 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
RPL13AP40429 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL13AP40429 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL13AP40429 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL13AP40429 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 MFF-207ENST00000409565 1548 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL13AP40429 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL13AP40429 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL13AP40429 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms