Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBPP18428 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.24■□□□□ 0.51
LBPP18428 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.24■□□□□ 0.51
LBPP18428 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LBPP18428 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LBPP18428 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LBPP18428 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LBPP18428 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
LBPP18428 ABALON-201ENST00000629058 1903 ntBASIC18.23■□□□□ 0.51
LBPP18428 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 AL133373.2-201ENST00000623187 2828 ntBASIC18.23■□□□□ 0.51
LBPP18428 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.23■□□□□ 0.51
LBPP18428 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.23■□□□□ 0.51
LBPP18428 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
LBPP18428 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
LBPP18428 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.23■□□□□ 0.51
LBPP18428 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.23■□□□□ 0.51
LBPP18428 UNC93B4-201ENST00000505679 747 ntBASIC18.23■□□□□ 0.51
LBPP18428 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LBPP18428 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LBPP18428 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.23■□□□□ 0.51
LBPP18428 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.23■□□□□ 0.51
LBPP18428 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 AC126763.1-201ENST00000552015 2118 ntBASIC18.23■□□□□ 0.51
LBPP18428 NOC2LP2-201ENST00000407594 1944 ntBASIC18.23■□□□□ 0.51
LBPP18428 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.23■□□□□ 0.51
LBPP18428 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.23■□□□□ 0.51
LBPP18428 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBPP18428 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
LBPP18428 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.22■□□□□ 0.51
LBPP18428 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.22■□□□□ 0.51
LBPP18428 C1QL1P1-201ENST00000568105 661 ntBASIC18.22■□□□□ 0.51
LBPP18428 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.22■□□□□ 0.51
LBPP18428 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.22■□□□□ 0.51
LBPP18428 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LBPP18428 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LBPP18428 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.22■□□□□ 0.51
LBPP18428 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.22■□□□□ 0.51
LBPP18428 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.22■□□□□ 0.51
LBPP18428 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.22■□□□□ 0.51
LBPP18428 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LBPP18428 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBPP18428 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 NBPF21P-201ENST00000425093 1451 ntBASIC18.21■□□□□ 0.51
LBPP18428 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LBPP18428 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.21■□□□□ 0.51
LBPP18428 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.21■□□□□ 0.51
LBPP18428 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.21■□□□□ 0.51
LBPP18428 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.21■□□□□ 0.51
LBPP18428 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.21■□□□□ 0.51
LBPP18428 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.21■□□□□ 0.51
LBPP18428 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBPP18428 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.21■□□□□ 0.51
LBPP18428 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms