Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRAFP15056 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.39■□□□□ 0.7
BRAFP15056 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BRAFP15056 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.39■□□□□ 0.7
BRAFP15056 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.39■□□□□ 0.7
BRAFP15056 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BRAFP15056 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.39■□□□□ 0.69
BRAFP15056 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.39■□□□□ 0.69
BRAFP15056 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.39■□□□□ 0.69
BRAFP15056 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
BRAFP15056 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.39■□□□□ 0.69
BRAFP15056 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.39■□□□□ 0.69
BRAFP15056 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BRAFP15056 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BRAFP15056 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRAFP15056 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRAFP15056 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BRAFP15056 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRAFP15056 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRAFP15056 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRAFP15056 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
BRAFP15056 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
BRAFP15056 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRAFP15056 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.38■□□□□ 0.69
BRAFP15056 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRAFP15056 AC068880.1-201ENST00000507289 2297 ntBASIC19.38■□□□□ 0.69
BRAFP15056 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.38■□□□□ 0.69
BRAFP15056 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
BRAFP15056 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
BRAFP15056 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.38■□□□□ 0.69
BRAFP15056 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.38■□□□□ 0.69
BRAFP15056 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.38■□□□□ 0.69
BRAFP15056 AP006294.2-201ENST00000641667 209 ntBASIC19.38■□□□□ 0.69
BRAFP15056 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRAFP15056 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.38■□□□□ 0.69
BRAFP15056 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
BRAFP15056 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 IRX1P1-201ENST00000438849 1838 ntBASIC19.37■□□□□ 0.69
BRAFP15056 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 FZD10-202ENST00000539839 3282 ntBASIC19.37■□□□□ 0.69
BRAFP15056 AC116351.2-201ENST00000606540 1585 ntBASIC19.37■□□□□ 0.69
BRAFP15056 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.37■□□□□ 0.69
BRAFP15056 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 PRKY-204ENST00000533551 1019 ntBASIC19.37■□□□□ 0.69
BRAFP15056 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 AC110285.5-201ENST00000611501 352 ntBASIC19.37■□□□□ 0.69
BRAFP15056 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.37■□□□□ 0.69
BRAFP15056 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.37■□□□□ 0.69
BRAFP15056 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRAFP15056 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
BRAFP15056 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRAFP15056 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRAFP15056 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
BRAFP15056 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms