Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 LINC00167-201ENST00000530583 1419 ntBASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 AP002469.2-201ENST00000531724 424 ntBASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 AC090616.6-201ENST00000582640 721 ntBASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSB-PGBD3P0DP91 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CSB-PGBD3P0DP91 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CSB-PGBD3P0DP91 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.95■■□□□ 1.59
CSB-PGBD3P0DP91 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CSB-PGBD3P0DP91 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
CSB-PGBD3P0DP91 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 AL109659.2-201ENST00000606809 1674 ntBASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 AC104390.1-201ENST00000555663 520 ntBASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSB-PGBD3P0DP91 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 BMF-207ENST00000559701 630 ntTSL 3 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 SLC25A6P4-201ENST00000586535 553 ntBASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CSB-PGBD3P0DP91 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 AC099336.1-202ENST00000602961 463 ntBASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 KRT8P7-201ENST00000533003 1432 ntBASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSB-PGBD3P0DP91 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms