Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDHA1P08559 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDHA1P08559 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PDHA1P08559 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.4■□□□□ 0.7
PDHA1P08559 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDHA1P08559 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.4■□□□□ 0.7
PDHA1P08559 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDHA1P08559 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDHA1P08559 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDHA1P08559 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDHA1P08559 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDHA1P08559 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PDHA1P08559 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PDHA1P08559 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PDHA1P08559 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PDHA1P08559 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 AC008040.2-201ENST00000461049 708 ntBASIC19.39■□□□□ 0.69
PDHA1P08559 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.39■□□□□ 0.69
PDHA1P08559 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.39■□□□□ 0.69
PDHA1P08559 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
PDHA1P08559 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.39■□□□□ 0.69
PDHA1P08559 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.39■□□□□ 0.69
PDHA1P08559 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.39■□□□□ 0.69
PDHA1P08559 AC018470.1-201ENST00000624790 3129 ntBASIC19.39■□□□□ 0.69
PDHA1P08559 RCC2P6-201ENST00000526625 1557 ntBASIC19.39■□□□□ 0.69
PDHA1P08559 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.39■□□□□ 0.69
PDHA1P08559 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.39■□□□□ 0.69
PDHA1P08559 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.39■□□□□ 0.69
PDHA1P08559 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.39■□□□□ 0.69
PDHA1P08559 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.39■□□□□ 0.69
PDHA1P08559 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.39■□□□□ 0.69
PDHA1P08559 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDHA1P08559 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.38■□□□□ 0.69
PDHA1P08559 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDHA1P08559 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDHA1P08559 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDHA1P08559 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PDHA1P08559 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDHA1P08559 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.38■□□□□ 0.69
PDHA1P08559 AL355355.2-201ENST00000442321 338 ntBASIC19.38■□□□□ 0.69
PDHA1P08559 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PDHA1P08559 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDHA1P08559 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.38■□□□□ 0.69
PDHA1P08559 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.38■□□□□ 0.69
PDHA1P08559 AP003071.4-201ENST00000562276 1284 ntBASIC19.38■□□□□ 0.69
PDHA1P08559 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.38■□□□□ 0.69
PDHA1P08559 AC026271.3-201ENST00000571884 352 ntBASIC19.38■□□□□ 0.69
PDHA1P08559 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.38■□□□□ 0.69
PDHA1P08559 REXO1L10P-201ENST00000615707 1290 ntBASIC19.38■□□□□ 0.69
PDHA1P08559 REXO1L12P-201ENST00000622156 912 ntBASIC19.38■□□□□ 0.69
PDHA1P08559 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDHA1P08559 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDHA1P08559 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PDHA1P08559 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.37■□□□□ 0.69
PDHA1P08559 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDHA1P08559 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.37■□□□□ 0.69
PDHA1P08559 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.37■□□□□ 0.69
PDHA1P08559 B3GAT3P1-201ENST00000471720 806 ntBASIC19.37■□□□□ 0.69
PDHA1P08559 AC091390.4-202ENST00000476426 537 ntBASIC19.37■□□□□ 0.69
PDHA1P08559 AC116562.2-201ENST00000507042 360 ntBASIC19.37■□□□□ 0.69
PDHA1P08559 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.37■□□□□ 0.69
PDHA1P08559 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.37■□□□□ 0.69
PDHA1P08559 MIR6786-201ENST00000616843 113 ntBASIC19.37■□□□□ 0.69
PDHA1P08559 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDHA1P08559 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PDHA1P08559 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDHA1P08559 TSPY15P-201ENST00000457163 923 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms