Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 CCR12P-201ENST00000446203 998 ntBASIC18.98■□□□□ 0.63
MMP2P08253 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP2P08253 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP2P08253 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP2P08253 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 AC116562.4-202ENST00000641738 218 ntBASIC18.98■□□□□ 0.63
MMP2P08253 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP2P08253 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP2P08253 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MMP2P08253 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP2P08253 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP2P08253 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP2P08253 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
MMP2P08253 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP2P08253 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.97■□□□□ 0.63
MMP2P08253 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP2P08253 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.96■□□□□ 0.63
MMP2P08253 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
MMP2P08253 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MMP2P08253 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.96■□□□□ 0.63
MMP2P08253 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MMP2P08253 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.96■□□□□ 0.63
MMP2P08253 MCCD1P1-208ENST00000445732 328 ntBASIC18.96■□□□□ 0.63
MMP2P08253 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 FAM87A-204ENST00000613235 858 ntBASIC18.96■□□□□ 0.63
MMP2P08253 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.96■□□□□ 0.63
MMP2P08253 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MMP2P08253 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
MMP2P08253 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP2P08253 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP2P08253 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.95■□□□□ 0.62
MMP2P08253 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.95■□□□□ 0.62
MMP2P08253 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MMP2P08253 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP2P08253 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP2P08253 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP2P08253 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 ECEL1P2-202ENST00000465689 757 ntBASIC18.95■□□□□ 0.62
MMP2P08253 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP2P08253 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MMP2P08253 AC010653.2-201ENST00000623505 997 ntBASIC18.95■□□□□ 0.62
MMP2P08253 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MMP2P08253 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 AL499627.1-201ENST00000569373 2188 ntBASIC18.95■□□□□ 0.62
MMP2P08253 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP2P08253 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP2P08253 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
MMP2P08253 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms