Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 AL499627.1-201ENST00000569373 2188 ntBASIC22.66■■□□□ 1.22
CHGBP05060 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CHGBP05060 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CHGBP05060 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 AC117947.1-201ENST00000427448 529 ntBASIC22.66■■□□□ 1.22
CHGBP05060 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.66■■□□□ 1.22
CHGBP05060 AC139887.4-201ENST00000607877 719 ntBASIC22.66■■□□□ 1.22
CHGBP05060 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
CHGBP05060 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGBP05060 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CHGBP05060 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CHGBP05060 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGBP05060 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.65■■□□□ 1.22
CHGBP05060 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 AC009947.2-201ENST00000444014 672 ntBASIC22.65■■□□□ 1.22
CHGBP05060 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
CHGBP05060 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CHGBP05060 AC141257.4-201ENST00000634557 245 ntBASIC22.65■■□□□ 1.22
CHGBP05060 AC136944.6-201ENST00000634818 245 ntBASIC22.65■■□□□ 1.22
CHGBP05060 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGBP05060 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.65■■□□□ 1.22
CHGBP05060 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGBP05060 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHGBP05060 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHGBP05060 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.64■■□□□ 1.22
CHGBP05060 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHGBP05060 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHGBP05060 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CHGBP05060 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.64■■□□□ 1.21
CHGBP05060 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.64■■□□□ 1.21
CHGBP05060 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHGBP05060 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CHGBP05060 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.64■■□□□ 1.21
CHGBP05060 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.64■■□□□ 1.21
CHGBP05060 AL023973.1-201ENST00000624619 620 ntBASIC22.64■■□□□ 1.21
CHGBP05060 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHGBP05060 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CHGBP05060 CROCCP3-202ENST00000420820 1947 ntBASIC22.64■■□□□ 1.21
CHGBP05060 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHGBP05060 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CHGBP05060 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHGBP05060 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.64■■□□□ 1.21
CHGBP05060 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CHGBP05060 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CHGBP05060 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.63■■□□□ 1.21
CHGBP05060 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CHGBP05060 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
CHGBP05060 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.63■■□□□ 1.21
CHGBP05060 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.63■■□□□ 1.21
CHGBP05060 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CHGBP05060 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.63■■□□□ 1.21
CHGBP05060 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHGBP05060 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.62■■□□□ 1.21
CHGBP05060 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
CHGBP05060 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 HEIH-201ENST00000623091 1652 ntBASIC22.62■■□□□ 1.21
CHGBP05060 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
CHGBP05060 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.62■■□□□ 1.21
CHGBP05060 AC018445.3-201ENST00000624177 1945 ntBASIC22.62■■□□□ 1.21
CHGBP05060 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHGBP05060 AC093503.3-201ENST00000624917 2352 ntBASIC22.62■■□□□ 1.21
CHGBP05060 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CHGBP05060 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHGBP05060 AC004408.2-201ENST00000623613 2777 ntBASIC22.61■■□□□ 1.21
CHGBP05060 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.61■■□□□ 1.21
CHGBP05060 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
CHGBP05060 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHGBP05060 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms