Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 HLA-F-220ENST00000434407 884 ntBASIC18.51■□□□□ 0.55
WNT1P04628 BX276092.5-203ENST00000456199 560 ntBASIC18.51■□□□□ 0.55
WNT1P04628 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.51■□□□□ 0.55
WNT1P04628 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.51■□□□□ 0.55
WNT1P04628 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
WNT1P04628 MIR3917-201ENST00000580971 93 ntBASIC18.51■□□□□ 0.55
WNT1P04628 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.51■□□□□ 0.55
WNT1P04628 AL121672.3-201ENST00000608644 468 ntBASIC18.51■□□□□ 0.55
WNT1P04628 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
WNT1P04628 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
WNT1P04628 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.51■□□□□ 0.55
WNT1P04628 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
WNT1P04628 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
WNT1P04628 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
WNT1P04628 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.5■□□□□ 0.55
WNT1P04628 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
WNT1P04628 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.5■□□□□ 0.55
WNT1P04628 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.5■□□□□ 0.55
WNT1P04628 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
WNT1P04628 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.5■□□□□ 0.55
WNT1P04628 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
WNT1P04628 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
WNT1P04628 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.5■□□□□ 0.55
WNT1P04628 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
WNT1P04628 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 AL391807.1-203ENST00000604392 2365 ntBASIC18.49■□□□□ 0.55
WNT1P04628 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
WNT1P04628 RCC2P3-201ENST00000418112 1537 ntBASIC18.49■□□□□ 0.55
WNT1P04628 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
WNT1P04628 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.49■□□□□ 0.55
WNT1P04628 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.49■□□□□ 0.55
WNT1P04628 MIR3652-201ENST00000579335 131 ntBASIC18.49■□□□□ 0.55
WNT1P04628 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.49■□□□□ 0.55
WNT1P04628 AL136038.4-201ENST00000603606 1261 ntBASIC18.49■□□□□ 0.55
WNT1P04628 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT1P04628 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
WNT1P04628 AC008556.1-201ENST00000610908 2040 ntBASIC18.49■□□□□ 0.55
WNT1P04628 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.49■□□□□ 0.55
WNT1P04628 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT1P04628 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
WNT1P04628 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 AL512353.2-201ENST00000448759 1962 ntBASIC18.48■□□□□ 0.55
WNT1P04628 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
WNT1P04628 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT1P04628 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.48■□□□□ 0.55
WNT1P04628 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT1P04628 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT1P04628 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT1P04628 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.48■□□□□ 0.55
WNT1P04628 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT1P04628 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms