Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF253O75346 AC093525.10-201ENST00000625130 1569 ntBASIC14.68□□□□□ -0.06
ZNF253O75346 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.68□□□□□ -0.06
ZNF253O75346 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF253O75346 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ZNF253O75346 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ZNF253O75346 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF253O75346 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF253O75346 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.68□□□□□ -0.06
ZNF253O75346 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 YBX1P10-201ENST00000444752 975 ntBASIC14.68□□□□□ -0.06
ZNF253O75346 RARRES2P6-201ENST00000567333 442 ntBASIC14.68□□□□□ -0.06
ZNF253O75346 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF253O75346 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF253O75346 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 CROCCP1-201ENST00000426910 5675 ntBASIC14.68□□□□□ -0.06
ZNF253O75346 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF253O75346 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF253O75346 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF253O75346 AC006333.2-201ENST00000607957 2099 ntBASIC14.67□□□□□ -0.06
ZNF253O75346 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
ZNF253O75346 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF253O75346 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF253O75346 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
ZNF253O75346 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
ZNF253O75346 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF253O75346 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
ZNF253O75346 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF253O75346 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF253O75346 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF253O75346 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 MIR5787-201ENST00000611784 55 ntBASIC14.67□□□□□ -0.06
ZNF253O75346 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF253O75346 AL121906.2-201ENST00000621597 723 ntBASIC14.67□□□□□ -0.06
ZNF253O75346 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ZNF253O75346 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ZNF253O75346 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF253O75346 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF253O75346 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 KRT8P8-201ENST00000434750 1448 ntBASIC14.66□□□□□ -0.06
ZNF253O75346 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF253O75346 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF253O75346 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ZNF253O75346 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF253O75346 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF253O75346 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF253O75346 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 BX276092.2-201ENST00000417668 665 ntBASIC14.66□□□□□ -0.06
ZNF253O75346 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF253O75346 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF253O75346 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF253O75346 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.66□□□□□ -0.06
ZNF253O75346 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF253O75346 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF253O75346 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF253O75346 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ZNF253O75346 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF253O75346 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.66□□□□□ -0.06
ZNF253O75346 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ZNF253O75346 AC104417.2-201ENST00000562989 1793 ntBASIC14.65□□□□□ -0.06
ZNF253O75346 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms