Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PEX1O43933 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
PEX1O43933 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PEX1O43933 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.37■□□□□ 0.53
PEX1O43933 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.37■□□□□ 0.53
PEX1O43933 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.37■□□□□ 0.53
PEX1O43933 AC023632.3-201ENST00000521633 145 ntBASIC18.37■□□□□ 0.53
PEX1O43933 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.37■□□□□ 0.53
PEX1O43933 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.37■□□□□ 0.53
PEX1O43933 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.37■□□□□ 0.53
PEX1O43933 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.37■□□□□ 0.53
PEX1O43933 MTDHP1-201ENST00000605323 784 ntBASIC18.37■□□□□ 0.53
PEX1O43933 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 AC141586.3-201ENST00000562166 1838 ntBASIC18.37■□□□□ 0.53
PEX1O43933 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PEX1O43933 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PEX1O43933 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.37■□□□□ 0.53
PEX1O43933 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PEX1O43933 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.36■□□□□ 0.53
PEX1O43933 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.36■□□□□ 0.53
PEX1O43933 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PEX1O43933 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.36■□□□□ 0.53
PEX1O43933 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.36■□□□□ 0.53
PEX1O43933 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.36■□□□□ 0.53
PEX1O43933 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PEX1O43933 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.36■□□□□ 0.53
PEX1O43933 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PEX1O43933 AC008550.1-201ENST00000511500 884 ntBASIC18.36■□□□□ 0.53
PEX1O43933 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.36■□□□□ 0.53
PEX1O43933 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PEX1O43933 AC012313.1-201ENST00000593393 3059 ntBASIC18.36■□□□□ 0.53
PEX1O43933 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PEX1O43933 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.36■□□□□ 0.53
PEX1O43933 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.36■□□□□ 0.53
PEX1O43933 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PEX1O43933 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PEX1O43933 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.35■□□□□ 0.53
PEX1O43933 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.35■□□□□ 0.53
PEX1O43933 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.35■□□□□ 0.53
PEX1O43933 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.35■□□□□ 0.53
PEX1O43933 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.35■□□□□ 0.53
PEX1O43933 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PEX1O43933 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.35■□□□□ 0.53
PEX1O43933 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.35■□□□□ 0.53
PEX1O43933 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.35■□□□□ 0.53
PEX1O43933 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.35■□□□□ 0.53
PEX1O43933 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
PEX1O43933 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.35■□□□□ 0.53
PEX1O43933 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PEX1O43933 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.35■□□□□ 0.53
PEX1O43933 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.35■□□□□ 0.53
PEX1O43933 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms