Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
SLC28A2O43868 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC28A2O43868 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC28A2O43868 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC28A2O43868 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC28A2O43868 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 TSPY14P-201ENST00000303979 915 ntBASIC18.16■□□□□ 0.5
SLC28A2O43868 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 AC091390.4-202ENST00000476426 537 ntBASIC18.16■□□□□ 0.5
SLC28A2O43868 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC28A2O43868 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC28A2O43868 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.16■□□□□ 0.5
SLC28A2O43868 AC139887.4-201ENST00000607877 719 ntBASIC18.16■□□□□ 0.5
SLC28A2O43868 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC28A2O43868 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC28A2O43868 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC28A2O43868 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC28A2O43868 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC28A2O43868 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC28A2O43868 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC28A2O43868 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC28A2O43868 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC28A2O43868 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC28A2O43868 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC28A2O43868 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC28A2O43868 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SLC28A2O43868 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC28A2O43868 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC28A2O43868 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC28A2O43868 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SLC28A2O43868 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC28A2O43868 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC28A2O43868 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC28A2O43868 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
SLC28A2O43868 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SLC28A2O43868 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC28A2O43868 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SLC28A2O43868 LINC01465-201ENST00000408887 1940 ntBASIC18.14■□□□□ 0.49
SLC28A2O43868 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC28A2O43868 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SLC28A2O43868 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC28A2O43868 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SLC28A2O43868 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC28A2O43868 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC28A2O43868 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC28A2O43868 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC28A2O43868 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC28A2O43868 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC28A2O43868 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC28A2O43868 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC28A2O43868 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC28A2O43868 AL121956.5-201ENST00000625261 221 ntBASIC18.14■□□□□ 0.49
SLC28A2O43868 AC004408.2-201ENST00000623613 2777 ntBASIC18.14■□□□□ 0.49
SLC28A2O43868 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC28A2O43868 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC28A2O43868 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms