Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 PLK5-205ENST00000642079 1969 ntBASIC18.46■□□□□ 0.55
TAF4O00268 AC004408.2-201ENST00000623613 2777 ntBASIC18.46■□□□□ 0.55
TAF4O00268 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TAF4O00268 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TAF4O00268 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TAF4O00268 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.45■□□□□ 0.54
TAF4O00268 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 AP006587.1-201ENST00000534129 1502 ntBASIC18.45■□□□□ 0.54
TAF4O00268 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.45■□□□□ 0.54
TAF4O00268 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.45■□□□□ 0.54
TAF4O00268 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.45■□□□□ 0.54
TAF4O00268 AL353719.1-201ENST00000566847 864 ntBASIC18.45■□□□□ 0.54
TAF4O00268 AL512604.3-201ENST00000569583 964 ntBASIC18.45■□□□□ 0.54
TAF4O00268 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.45■□□□□ 0.54
TAF4O00268 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.45■□□□□ 0.54
TAF4O00268 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TAF4O00268 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.44■□□□□ 0.54
TAF4O00268 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TAF4O00268 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.44■□□□□ 0.54
TAF4O00268 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.44■□□□□ 0.54
TAF4O00268 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.44■□□□□ 0.54
TAF4O00268 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
TAF4O00268 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.44■□□□□ 0.54
TAF4O00268 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TAF4O00268 YBX1P10-201ENST00000444752 975 ntBASIC18.44■□□□□ 0.54
TAF4O00268 TSPY17P-201ENST00000450329 467 ntBASIC18.44■□□□□ 0.54
TAF4O00268 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.44■□□□□ 0.54
TAF4O00268 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.44■□□□□ 0.54
TAF4O00268 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
TAF4O00268 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TAF4O00268 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.44■□□□□ 0.54
TAF4O00268 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TAF4O00268 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.44■□□□□ 0.54
TAF4O00268 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.44■□□□□ 0.54
TAF4O00268 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.43■□□□□ 0.54
TAF4O00268 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TAF4O00268 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.43■□□□□ 0.54
TAF4O00268 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.43■□□□□ 0.54
TAF4O00268 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.43■□□□□ 0.54
TAF4O00268 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.43■□□□□ 0.54
TAF4O00268 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TAF4O00268 HLA-G-202ENST00000376815 851 ntBASIC18.43■□□□□ 0.54
TAF4O00268 HLA-G-203ENST00000376818 1127 ntBASIC18.43■□□□□ 0.54
TAF4O00268 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 AC004951.3-201ENST00000418645 1148 ntBASIC18.43■□□□□ 0.54
TAF4O00268 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.43■□□□□ 0.54
TAF4O00268 AC092329.2-201ENST00000598402 547 ntBASIC18.43■□□□□ 0.54
TAF4O00268 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.43■□□□□ 0.54
TAF4O00268 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TAF4O00268 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.43■□□□□ 0.54
TAF4O00268 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TAF4O00268 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TAF4O00268 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms