Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.53□□□□□ -0.08
COLCA2A8K830 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.53□□□□□ -0.08
COLCA2A8K830 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.53□□□□□ -0.08
COLCA2A8K830 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.53□□□□□ -0.08
COLCA2A8K830 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.53□□□□□ -0.08
COLCA2A8K830 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 AC010525.1-201ENST00000585559 441 ntBASIC14.53□□□□□ -0.08
COLCA2A8K830 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COLCA2A8K830 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COLCA2A8K830 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COLCA2A8K830 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COLCA2A8K830 AGGF1P2-201ENST00000426656 2106 ntBASIC14.53□□□□□ -0.08
COLCA2A8K830 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.53□□□□□ -0.08
COLCA2A8K830 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COLCA2A8K830 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COLCA2A8K830 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.52□□□□□ -0.08
COLCA2A8K830 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.52□□□□□ -0.08
COLCA2A8K830 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.52□□□□□ -0.08
COLCA2A8K830 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
COLCA2A8K830 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.52□□□□□ -0.08
COLCA2A8K830 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
COLCA2A8K830 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COLCA2A8K830 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
COLCA2A8K830 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COLCA2A8K830 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
COLCA2A8K830 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COLCA2A8K830 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.52□□□□□ -0.09
COLCA2A8K830 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COLCA2A8K830 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.52□□□□□ -0.09
COLCA2A8K830 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
COLCA2A8K830 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COLCA2A8K830 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COLCA2A8K830 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
COLCA2A8K830 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COLCA2A8K830 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
COLCA2A8K830 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COLCA2A8K830 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
COLCA2A8K830 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COLCA2A8K830 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COLCA2A8K830 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.51□□□□□ -0.09
COLCA2A8K830 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.51□□□□□ -0.09
COLCA2A8K830 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COLCA2A8K830 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.51□□□□□ -0.09
COLCA2A8K830 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.51□□□□□ -0.09
COLCA2A8K830 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COLCA2A8K830 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COLCA2A8K830 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.51□□□□□ -0.09
COLCA2A8K830 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.5□□□□□ -0.09
COLCA2A8K830 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COLCA2A8K830 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.5□□□□□ -0.09
COLCA2A8K830 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.5□□□□□ -0.09
COLCA2A8K830 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
COLCA2A8K830 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COLCA2A8K830 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms