Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TSPY15P-201ENST00000457163 923 ntBASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 CROCCP3-202ENST00000420820 1947 ntBASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC196A0A1B0GTZ2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 AL023803.3-201ENST00000615559 522 ntBASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 AC068587.9-201ENST00000641814 219 ntBASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC196A0A1B0GTZ2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC196A0A1B0GTZ2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 TSPY14P-201ENST00000303979 915 ntBASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 AL353719.1-201ENST00000566847 864 ntBASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 AC116562.4-202ENST00000641738 218 ntBASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 Z98044.1-201ENST00000632503 1764 ntBASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC196A0A1B0GTZ2 RCC2P3-201ENST00000418112 1537 ntBASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 EGLN1P1-201ENST00000531623 762 ntBASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 BX088651.1-201ENST00000540551 451 ntBASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 NAPSB-206ENST00000562112 1266 ntBASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 AC008622.2-201ENST00000617006 1229 ntBASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 AL109659.2-201ENST00000606809 1674 ntBASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCDC196A0A1B0GTZ2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC196A0A1B0GTZ2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC196A0A1B0GTZ2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC196A0A1B0GTZ2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC196A0A1B0GTZ2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms