Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 KRT18P5-201ENST00000436075 1291 ntBASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FLJ13224-201ENST00000313737 1514 ntBASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 KRT8P32-201ENST00000512863 1461 ntBASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-1A0A0K0K1D8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms